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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0167519 |
| Transcript ID | Lj0g3v0167519.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | zinc transporter protein [Ammopiptanthus nanus] gi|294845792|gb|ADF43066.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| TMHMM | 5 | 22 | 18 | – | – | |
| Phobius | 7 | 15 | 9 | – | – | |
| Phobius | 16 | 21 | 6 | – | – | |
| PANTHER | 22 | 338 | 317 | 8.30E-222 | – | |
| PANTHER | 22 | 338 | 317 | 8.30E-222 | – | |
| Phobius | 22 | 39 | 18 | – | – | |
| TIGRFAM | 23 | 338 | 316 | 1.80E-137 | ||
| Phobius | 40 | 62 | 23 | – | – | |
| Pfam | 40 | 335 | 296 | 8.10E-72 | ||
| TMHMM | 42 | 61 | 20 | – | – | |
| Phobius | 63 | 73 | 11 | – | – | |
| Phobius | 74 | 95 | 22 | – | – | |
| TMHMM | 74 | 96 | 23 | – | – | |
| Phobius | 96 | 114 | 19 | – | – | |
| Phobius | 115 | 140 | 26 | – | – | |
| TMHMM | 116 | 138 | 23 | – | – | |
| Phobius | 141 | 187 | 47 | – | – | |
| Phobius | 188 | 207 | 20 | – | – | |
| Phobius | 208 | 212 | 5 | – | – | |
| Phobius | 213 | 232 | 20 | – | – | |
| Phobius | 233 | 243 | 11 | – | – | |
| TMHMM | 244 | 266 | 23 | – | – | |
| Phobius | 244 | 266 | 23 | – | – | |
| Phobius | 267 | 285 | 19 | – | – | |
| TMHMM | 276 | 298 | 23 | – | – | |
| Phobius | 286 | 306 | 21 | – | – | |
| Phobius | 307 | 317 | 11 | – | – | |
| Phobius | 318 | 337 | 20 | – | – | |
| TMHMM | 318 | 335 | 18 | – | – | |
| Phobius | 338 | 338 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion transmembrane transporter activity | Enables the transfer of zinc (Zn) ions from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. | ||
| Biological process | Zinc ion transmembrane transport | A process in which a zinc II ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of Lj0g3v0167519.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0167519.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.