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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0182159 |
| Transcript ID | Lj0g3v0182159.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase ATM-like [Cicer arietinum] gi|502133902|ref|XP_004501929.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 18 | 18 | – | – | |
| PANTHER | 1 | 910 | 910 | 0 | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| PANTHER | 1 | 910 | 910 | 0 | – | |
| Phobius | 2 | 13 | 12 | – | – | |
| Phobius | 14 | 18 | 5 | – | – | |
| Phobius | 19 | 290 | 272 | – | – | |
| Phobius | 291 | 313 | 23 | – | – | |
| SUPERFAMILY | 301 | 379 | 79 | 2.25E-10 | ||
| Phobius | 314 | 578 | 265 | – | – | |
| Gene3D | 409 | 470 | 62 | 4.10E-06 | ||
| SUPERFAMILY | 410 | 570 | 161 | 2.25E-10 | ||
| Gene3D | 508 | 509 | 2 | 4.10E-06 | ||
| Gene3D | 542 | 586 | 45 | 4.10E-06 | ||
| Phobius | 579 | 598 | 20 | – | – | |
| Phobius | 599 | 1431 | 833 | – | – | |
| SUPERFAMILY | 676 | 713 | 38 | 2.25E-10 | ||
| SUPERFAMILY | 780 | 1023 | 244 | 2.25E-10 | ||
| Gene3D | 1049 | 1091 | 43 | 4.10E-06 | ||
| MobiDBLite | 1256 | 1282 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0182159.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0182159.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.