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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0188689 |
| Transcript ID | Lj0g3v0188689.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At3g49740-like [Cicer arietinum] gi|502165633|ref|XP_004513641.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 242 | 237 | 9.40E-197 | – | |
| Pfam | 6 | 53 | 48 | 5.00E-11 | ||
| ProSiteProfiles | 6 | 41 | 36 | 10.326 | ||
| PANTHER | 6 | 242 | 237 | 9.40E-197 | – | |
| ProSiteProfiles | 76 | 106 | 31 | 5.963 | ||
| Pfam | 80 | 103 | 24 | 0.14 | ||
| ProSiteProfiles | 109 | 143 | 35 | 11.345 | ||
| Pfam | 109 | 155 | 47 | 1.40E-09 | ||
| TIGRFAM | 111 | 143 | 33 | 1.20E-06 | ||
| ProSiteProfiles | 176 | 206 | 31 | 6.358 | ||
| ProSiteProfiles | 207 | 241 | 35 | 9.997 | ||
| Pfam | 207 | 251 | 45 | 9.60E-10 | ||
| TIGRFAM | 209 | 243 | 35 | 5.50E-04 | ||
| ProSiteProfiles | 273 | 307 | 35 | 8.561 | ||
| Gene3D | 274 | 300 | 27 | 9.70E-04 | ||
| PANTHER | 274 | 446 | 173 | 9.40E-197 | – | |
| PANTHER | 274 | 446 | 173 | 9.40E-197 | – | |
| TIGRFAM | 277 | 298 | 22 | 7.10E-04 | ||
| Pfam | 277 | 298 | 22 | 7.40E-04 | ||
| Pfam | 306 | 326 | 21 | 1.2 | ||
| Gene3D | 332 | 340 | 9 | 9.70E-04 | ||
| ProSiteProfiles | 339 | 373 | 35 | 6.16 | ||
| ProSiteProfiles | 374 | 404 | 31 | 6.982 | ||
| Gene3D | 377 | 431 | 55 | 9.70E-04 | ||
| Pfam | 379 | 404 | 26 | 0.026 | ||
| Pfam | 405 | 447 | 43 | 3.90E-09 | ||
| ProSiteProfiles | 405 | 440 | 36 | 9.788 | ||
| TIGRFAM | 407 | 441 | 35 | 1.50E-06 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0188689.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0188689.1, powered by CORGI.
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