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Lj0g3v0189439.1

Overview

Field Value
Gene ID Lj0g3v0189439
Transcript ID Lj0g3v0189439.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phosphoinositide phospholipase C 6-like [Cicer arietinum] gi|502129978|ref|XP_004500489.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10336:SF92
1 195 195 1.40E-133 –
PANTHER
PTHR10336
1 195 195 1.40E-133
IPR001192
SMART
SM00149
2 102 101 1.50E-45
IPR001711
SUPERFAMILY
SSF51695
8 113 106 2.56E-38
IPR017946
Gene3D
G3DSA:3.20.20.190
11 107 97 4.50E-33
IPR017946
Pfam
PF00387
12 101 90 8.70E-29
IPR001711
ProSiteProfiles
PS50008
15 101 87 35.653
IPR001711
PRINTS
PR00390
40 61 22 8.50E-12
IPR001192
PRINTS
PR00390
61 79 19 8.50E-12
IPR001192
Gene3D
G3DSA:2.60.40.150
108 191 84 5.40E-10
IPR000008
ProSiteProfiles
PS50004
112 195 84 9.406
IPR000008
CDD
cd00275
120 195 76 6.01E-17 –
Pfam
PF00168
122 189 68 8.70E-06
IPR000008
SUPERFAMILY
SSF49562
122 195 74 6.40E-13
IPR000008

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004435
Molecular function Phosphatidylinositol phospholipase C activity Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1,2-diacylglycerol + 1D-myo-inositol 1,4,5-trisphosphate + H(+).
Subterm of
GO:0006629
Biological process Lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
Subterm of
GO:0007165
Biological process Signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
Subterm of
Part of
GO:0008081
Molecular function Phosphoric diester hydrolase activity Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group.
Subterm of
GO:0035556
Biological process Intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0189439.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0189439.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.