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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001711
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We have found 22 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.755s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0130579.1
n.a. PREDICTED: phosphoinositide phospholipase C 6-like [Cicer arietinum] gi|502097439|ref|XP_004490993.1| chr0 59257145 59261182 +
4 domain predictions
4 GO terms
Lj0g3v0189439.1
n.a. PREDICTED: phosphoinositide phospholipase C 6-like [Cicer arietinum] gi|502129978|ref|XP_004500489.1| chr0 92626696 92629783 -
4 domain predictions
4 GO terms
Lj0g3v0189439.3
n.a. Phosphoinositide phospholipase C [Medicago truncatula] gi|357461225|ref|XP_003600894.1| chr0 92628071 92629776 -
4 domain predictions
4 GO terms
Lj2g3v2256390.1
n.a. PREDICTED: phosphoinositide phospholipase C 4-like [Cicer arietinum] gi|502096021|ref|XP_004490600.1| chr2 33184565 33193608 +
4 domain predictions
4 GO terms
Lj2g3v2256400.1
n.a. PREDICTED: phosphoinositide phospholipase C 2-like [Cicer arietinum] gi|502096024|ref|XP_004490601.1| chr2 33194152 33208074 +
4 domain predictions
4 GO terms
Lj2g3v2747660.1
n.a. PREDICTED: phosphoinositide phospholipase C 6-like [Glycine max] gi|356553781|ref|XP_003545231.1| chr2 36363100 36366521 +
4 domain predictions
4 GO terms
Lj2g3v2747660.2
n.a. PREDICTED: phosphoinositide phospholipase C 6-like isoform X1 [Cicer arietinum] gi|502097427|ref|XP_004490990.1| chr2 36363100 36366521 +
4 domain predictions
4 GO terms
Lj2g3v2748690.1
n.a. PREDICTED: phosphoinositide phospholipase C 2-like [Cicer arietinum] gi|502097443|ref|XP_004490994.1| chr2 36378390 36382554 +
4 domain predictions
4 GO terms
Lj6g3v0521600.1
n.a. phospholipase C [Pisum sativum] gi|21955869|emb|CAA75546.2| chr6 5082797 5084341 -
4 domain predictions
4 GO terms
Lj6g3v0521600.2
n.a. PREDICTED: phosphoinositide phospholipase C 2-like isoform X1 [Cicer arietinum] gi|502129981|ref|XP_004500490.1| chr6 5082797 5087998 -
4 domain predictions
4 GO terms
Lj6g3v0521600.3
n.a. PREDICTED: phosphoinositide phospholipase C 2-like isoform X2 [Cicer arietinum] gi|502129984|ref|XP_004500491.1| chr6 5082797 5087998 -
4 domain predictions
4 GO terms
Lj6g3v0521670.1
n.a. PREDICTED: phosphoinositide phospholipase C 6-like [Glycine max] gi|356539975|ref|XP_003538468.1| chr6 5110938 5116642 -
4 domain predictions
4 GO terms
LotjaGi1g1v0077600.1
n.a. Phosphoinositide phospholipase C; TAIR: AT3G08510.1 phospholipase C 2; Swiss-Prot: sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2; TrEMBL-Plants: tr|Q43443|Q43443_SOYBN Phosphoinositide phospholipase C; Found in the gene: LotjaGi1g1v0077600 LjG1.1_chr1 11210093 11214949 -
4 domain predictions
4 GO terms
LotjaGi1g1v0077700.1
n.a. Phosphoinositide phospholipase C; TAIR: AT2G40116.1 Phosphoinositide-specific phospholipase C family protein; Swiss-Prot: sp|Q8GV43|PLCD6_ARATH Phosphoinositide phospholipase C 6; TrEMBL-Plants: tr|G7KH09|G7KH09_MEDTR Phosphoinositide phospholipase C; Found in the gene: LotjaGi1g1v0077700 LjG1.1_chr1 11219104 11223311 -
4 domain predictions
4 GO terms
LotjaGi1g1v0077700.2
n.a. Phosphoinositide phospholipase C; TAIR: AT2G40116.1 Phosphoinositide-specific phospholipase C family protein; Swiss-Prot: sp|Q8GV43|PLCD6_ARATH Phosphoinositide phospholipase C 6; TrEMBL-Plants: tr|G7KH09|G7KH09_MEDTR Phosphoinositide phospholipase C; Found in the gene: LotjaGi1g1v0077700 LjG1.1_chr1 11219256 11223138 -
4 domain predictions
4 GO terms
LotjaGi1g1v0077700.3
n.a. Phosphoinositide phospholipase C; TAIR: AT2G40116.1 Phosphoinositide-specific phospholipase C family protein; Swiss-Prot: sp|Q8GV43|PLCD6_ARATH Phosphoinositide phospholipase C 6; TrEMBL-Plants: tr|G7KH09|G7KH09_MEDTR Phosphoinositide phospholipase C; Found in the gene: LotjaGi1g1v0077700 LjG1.1_chr1 11219356 11221865 -
4 domain predictions
4 GO terms
LotjaGi1g1v0077800.1
n.a. Phosphoinositide phospholipase C; TAIR: AT2G40116.1 Phosphoinositide-specific phospholipase C family protein; Swiss-Prot: sp|Q8GV43|PLCD6_ARATH Phosphoinositide phospholipase C 6; TrEMBL-Plants: tr|A0A151R1A5|A0A151R1A5_CAJCA Phosphoinositide phospholipase C; Found in the gene: LotjaGi1g1v0077800 LjG1.1_chr1 11256904 11261952 -
4 domain predictions
4 GO terms
LotjaGi1g1v0120100.1
n.a. Phosphoinositide phospholipase C; TAIR: AT3G08510.1 phospholipase C 2; Swiss-Prot: sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2; TrEMBL-Plants: tr|G7JZH5|G7JZH5_MEDTR Phosphoinositide phospholipase C; Found in the gene: LotjaGi1g1v0120100 LjG1.1_chr1 18981931 18994721 -
4 domain predictions
4 GO terms
LotjaGi1g1v0120200.1
n.a. Phosphoinositide phospholipase C; TAIR: AT5G58700.1 phosphatidylinositol-speciwc phospholipase C4; Swiss-Prot: sp|Q944C1|PLCD4_ARATH Phosphoinositide phospholipase C 4; TrEMBL-Plants: tr|G7KE98|G7KE98_MEDTR Phosphoinositide phospholipase C; Found in the gene: LotjaGi1g1v0120200 LjG1.1_chr1 18995173 19004188 -
4 domain predictions
4 GO terms
LotjaGi6g1v0075400.1
n.a. Phosphoinositide phospholipase C; TAIR: AT2G40116.1 Phosphoinositide-specific phospholipase C family protein; Swiss-Prot: sp|Q8GV43|PLCD6_ARATH Phosphoinositide phospholipase C 6; TrEMBL-Plants: tr|K7LRR0|K7LRR0_SOYBN Phosphoinositide phospholipase C; Found in the gene: LotjaGi6g1v0075400 LjG1.1_chr6 14248616 14254581 +
4 domain predictions
4 GO terms
LotjaGi6g1v0075500.1
n.a. Phosphoinositide phospholipase C; TAIR: AT3G08510.1 phospholipase C 2; Swiss-Prot: sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2; TrEMBL-Plants: tr|A0A0S3S0S5|A0A0S3S0S5_PHAAN Phosphoinositide phospholipase C; Found in the gene: LotjaGi6g1v0075500 LjG1.1_chr6 14287116 14293406 +
4 domain predictions
4 GO terms
LotjaGi6g1v0075500.2
n.a. Phosphoinositide phospholipase C; TAIR: AT3G08510.1 phospholipase C 2; Swiss-Prot: sp|Q39033|PLCD2_ARATH Phosphoinositide phospholipase C 2; TrEMBL-Plants: tr|A0A0S3S0S5|A0A0S3S0S5_PHAAN Phosphoinositide phospholipase C; Found in the gene: LotjaGi6g1v0075500 LjG1.1_chr6 14287116 14293406 +
4 domain predictions
4 GO terms