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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0197329 |
| Transcript ID | Lj0g3v0197329.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | chloroplast biogenesis protein [Lotus japonicus] gi|27464259|gb|AAO16018.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 121 | 121 | – | – | |
| PANTHER | 10 | 343 | 334 | 2.30E-216 | – | |
| PANTHER | 10 | 343 | 334 | 2.30E-216 | – | |
| Phobius | 122 | 146 | 25 | – | – | |
| TMHMM | 124 | 146 | 23 | – | – | |
| Pfam | 125 | 332 | 208 | 8.10E-43 | ||
| Phobius | 147 | 165 | 19 | – | – | |
| TMHMM | 161 | 183 | 23 | – | – | |
| Phobius | 166 | 187 | 22 | – | – | |
| Phobius | 188 | 198 | 11 | – | – | |
| TMHMM | 196 | 218 | 23 | – | – | |
| Phobius | 199 | 220 | 22 | – | – | |
| Phobius | 221 | 239 | 19 | – | – | |
| Phobius | 240 | 269 | 30 | – | – | |
| TMHMM | 247 | 269 | 23 | – | – | |
| Phobius | 270 | 280 | 11 | – | – | |
| TMHMM | 276 | 298 | 23 | – | – | |
| Phobius | 281 | 302 | 22 | – | – | |
| Phobius | 303 | 313 | 11 | – | – | |
| TMHMM | 313 | 332 | 20 | – | – | |
| Phobius | 314 | 332 | 19 | – | – | |
| Phobius | 333 | 343 | 11 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Cytochrome complex assembly | The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj0g3v0197329.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0197329.1, powered by CORGI.
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