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Lj0g3v0199229.1

Overview

Field Value
Gene ID Lj0g3v0199229
Transcript ID Lj0g3v0199229.1
Lotus japonicus genome version MG20 v3.0
Description glutaredoxin-related protein [Arabidopsis thaliana] gi|18399411|ref|NP_566405.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 30 30 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
1 328 328 – –
ProSiteProfiles
PS51354
150 247 98 17.788
IPR002109
PANTHER
PTHR23054
158 318 161 1.00E-60 –
PANTHER
PTHR23054:SF14
158 318 161 1.00E-60 –
SUPERFAMILY
SSF52833
159 241 83 1.29E-17
IPR012336
Gene3D
G3DSA:3.40.30.10
161 242 82 9.60E-19
IPR012336
PRINTS
PR00160
162 180 19 3.10E-05
IPR014025
Pfam
PF00462
164 221 58 2.60E-15
IPR002109
Coils
Coil
185 205 21 – –
PRINTS
PR00160
204 217 14 3.10E-05
IPR014025
PRINTS
PR00160
218 231 14 3.10E-05
IPR014025
SUPERFAMILY
SSF46785
270 333 64 1.09E-05
IPR011991
CDD
cd04371
279 314 36 1.08E-04 –
Gene3D
G3DSA:1.10.10.10
281 317 37 3.40E-04
IPR011991
TMHMM
TMhelix
328 350 23 – –
Phobius
TRANSMEMBRANE
329 350 22 – –
Phobius
CYTOPLASMIC_DOMAIN
351 351 1 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009055
Molecular function Electron transfer activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
Subterm of
GO:0015035
Molecular function Protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
Subterm of
GO:0045454
Biological process Cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0199229.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0199229.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.