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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0200899 |
| Transcript ID | Lj0g3v0200899.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: zinc transporter 5-like [Cicer arietinum] gi|502134356|ref|XP_004502089.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 9 | 9 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| TMHMM | 9 | 31 | 23 | – | – | |
| Phobius | 10 | 21 | 12 | – | – | |
| Phobius | 22 | 27 | 6 | – | – | |
| PANTHER | 28 | 353 | 326 | 1.80E-240 | – | |
| PANTHER | 28 | 353 | 326 | 1.80E-240 | – | |
| Phobius | 28 | 42 | 15 | – | – | |
| TIGRFAM | 29 | 353 | 325 | 3.50E-139 | ||
| Phobius | 43 | 68 | 26 | – | – | |
| Pfam | 46 | 350 | 305 | 8.70E-75 | ||
| TMHMM | 46 | 68 | 23 | – | – | |
| Phobius | 69 | 79 | 11 | – | – | |
| Phobius | 80 | 101 | 22 | – | – | |
| TMHMM | 80 | 102 | 23 | – | – | |
| Phobius | 102 | 120 | 19 | – | – | |
| Phobius | 121 | 146 | 26 | – | – | |
| TMHMM | 122 | 144 | 23 | – | – | |
| Phobius | 147 | 202 | 56 | – | – | |
| Phobius | 203 | 222 | 20 | – | – | |
| Phobius | 223 | 227 | 5 | – | – | |
| Phobius | 228 | 250 | 23 | – | – | |
| Phobius | 251 | 261 | 11 | – | – | |
| TMHMM | 259 | 281 | 23 | – | – | |
| Phobius | 262 | 285 | 24 | – | – | |
| Phobius | 286 | 296 | 11 | – | – | |
| TMHMM | 291 | 313 | 23 | – | – | |
| Phobius | 297 | 321 | 25 | – | – | |
| Phobius | 322 | 332 | 11 | – | – | |
| Phobius | 333 | 352 | 20 | – | – | |
| TMHMM | 333 | 350 | 18 | – | – | |
| Phobius | 353 | 353 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion transmembrane transporter activity | Enables the transfer of zinc (Zn) ions from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. | ||
| Biological process | Zinc ion transmembrane transport | A process in which a zinc II ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of Lj0g3v0200899.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0200899.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.