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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0207049 |
| Transcript ID | Lj0g3v0207049.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Leucine-rich repeat-containing protein [Medicago truncatula] gi|357489671|ref|XP_003615123.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 87 | 174 | 88 | 1.60E-124 | – | |
| PANTHER | 87 | 174 | 88 | 1.60E-124 | – | |
| PANTHER | 350 | 359 | 10 | 1.60E-124 | – | |
| PANTHER | 350 | 359 | 10 | 1.60E-124 | – | |
| PANTHER | 390 | 597 | 208 | 1.60E-124 | – | |
| PANTHER | 390 | 597 | 208 | 1.60E-124 | – | |
| Gene3D | 420 | 593 | 174 | 1.60E-38 | ||
| SUPERFAMILY | 423 | 588 | 166 | 5.36E-33 | – | |
| SMART | 433 | 455 | 23 | 1.7 | ||
| ProSiteProfiles | 435 | 455 | 21 | 6.834 | ||
| SMART | 455 | 476 | 22 | 140 | – | |
| ProSiteProfiles | 457 | 478 | 22 | 8.305 | ||
| Pfam | 459 | 547 | 89 | 6.40E-09 | – | |
| SMART | 477 | 500 | 24 | 0.0038 | ||
| SMART | 477 | 499 | 23 | 1.4 | – | |
| ProSiteProfiles | 479 | 501 | 23 | 8.02 | ||
| ProSiteProfiles | 502 | 523 | 22 | 7.904 | ||
| SMART | 503 | 521 | 19 | 41 | – | |
| SMART | 522 | 544 | 23 | 130 | ||
| SMART | 522 | 543 | 22 | 150 | – | |
| ProSiteProfiles | 524 | 545 | 22 | 7.042 | ||
| ProSiteProfiles | 550 | 571 | 22 | 6.218 | ||
| MobiDBLite | 621 | 647 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0207049.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0207049.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.