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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0217409 |
| Transcript ID | Lj0g3v0217409.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max] gi|356560149|ref|XP_003548358.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 54 | 54 | 4.20E-08 | ||
| SMART | 1 | 57 | 57 | 73 | ||
| Pfam | 1 | 49 | 49 | 3.10E-16 | ||
| ProSiteProfiles | 1 | 67 | 67 | 17.374 | ||
| PANTHER | 1 | 772 | 772 | 4.50E-174 | – | |
| PANTHER | 1 | 772 | 772 | 4.50E-174 | – | |
| Gene3D | 2 | 69 | 68 | 6.80E-17 | ||
| SUPERFAMILY | 2 | 68 | 67 | 1.44E-16 | ||
| SUPERFAMILY | 166 | 249 | 84 | 9.03E-15 | ||
| ProSiteProfiles | 166 | 258 | 93 | 14.675 | ||
| Pfam | 168 | 244 | 77 | 6.40E-07 | ||
| SMART | 168 | 248 | 81 | 8.40E-08 | ||
| Gene3D | 170 | 252 | 83 | 2.40E-14 | ||
| CDD | 173 | 244 | 72 | 2.23E-06 | ||
| ProSiteProfiles | 362 | 450 | 89 | 14.313 | ||
| Pfam | 364 | 447 | 84 | 1.20E-07 | ||
| Gene3D | 364 | 452 | 89 | 2.40E-13 | ||
| SMART | 364 | 440 | 77 | 0.96 | ||
| SUPERFAMILY | 365 | 452 | 88 | 3.01E-13 | ||
| CDD | 369 | 438 | 70 | 4.55E-05 | ||
| SUPERFAMILY | 428 | 547 | 120 | 5.50E-26 | ||
| SMART | 460 | 536 | 77 | 1.40E-10 | ||
| Gene3D | 463 | 554 | 92 | 6.10E-25 | ||
| ProSiteProfiles | 463 | 546 | 84 | 15.983 | ||
| CDD | 466 | 534 | 69 | 2.28E-07 | ||
| Pfam | 467 | 528 | 62 | 3.30E-21 | ||
| MobiDBLite | 690 | 743 | 54 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0217409.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0217409.2, powered by CORGI.
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