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Lj0g3v0221189.1

Overview

Field Value
Gene ID Lj0g3v0221189
Transcript ID Lj0g3v0221189.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ribokinase-like isoform X2 [Cicer arietinum] gi|502114755|ref|XP_004495042.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 62 62 – –
PANTHER
PTHR10584:SF190
52 294 243 2.50E-107 –
PANTHER
PTHR10584
52 294 243 2.50E-107 –
Gene3D
G3DSA:3.40.1190.20
66 306 241 3.90E-70
IPR029056
SUPERFAMILY
SSF53613
72 309 238 4.12E-53
IPR029056
CDD
cd01945
73 412 340 1.69E-83 –
PRINTS
PR00990
73 94 22 1.40E-08
IPR002139
Pfam
PF00294
79 296 218 1.30E-22
IPR011611
PRINTS
PR00990
100 119 20 1.40E-08
IPR002139
PRINTS
PR00990
241 256 16 1.40E-08
IPR002139
PRINTS
PR00990
282 293 12 1.40E-08
IPR002139
PANTHER
PTHR10584:SF190
347 415 69 2.50E-107 –
PANTHER
PTHR10584
347 415 69 2.50E-107 –
SUPERFAMILY
SSF53613
353 413 61 4.12E-53
IPR029056
Pfam
PF00294
355 411 57 3.70E-12
IPR011611
Gene3D
G3DSA:3.40.1190.20
357 414 58 3.90E-70
IPR029056
ProSitePatterns
PS00584
364 377 14 –
IPR002173

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of
GO:0016773
Molecular function Phosphotransferase activity, alcohol group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj0g3v0221189.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0221189.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.