Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002139
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 26 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.625s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0221189.1
n.a. PREDICTED: ribokinase-like isoform X2 [Cicer arietinum] gi|502114755|ref|XP_004495042.1| chr0 113429071 113434631 +
2 domain predictions
1 GO term
Lj0g3v0274999.1
n.a. PREDICTED: ribokinase-like isoform 1 [Glycine max] gi|356556858|ref|XP_003546737.1| chr0 142647669 142658093 -
2 domain predictions
1 GO term
Lj2g3v0462540.1
n.a. Fructokinase [Medicago truncatula] gi|357500871|ref|XP_003620724.1| chr2 6564738 6569458 -
2 domain predictions
1 GO term
Lj3g3v0381590.1
n.a. PREDICTED: fructokinase-2-like [Glycine max] gi|356557199|ref|XP_003546905.1| chr3 3011033 3014492 -
2 domain predictions
1 GO term
Lj3g3v3639430.1
n.a. Carbohydrate kinase-like protein [Medicago truncatula] gi|357474331|ref|XP_003607450.1| chr3 44102909 44107220 -
2 domain predictions
1 GO term
Lj5g3v2029610.1
n.a. Fructokinase [Medicago truncatula] gi|357444145|ref|XP_003592350.1| chr5 28745368 28748715 -
2 domain predictions
1 GO term
LotjaGi1g1v0093300.1
n.a. PfkB family carbohydrate kinase; TAIR: AT1G66430.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9C524|SCRK6_ARATH Probable fructokinase-6, chloroplastic; TrEMBL-Plants: tr|C6TGN8|C6TGN8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0093300 LjG1.1_chr1 13664893 13670914 -
2 domain predictions
1 GO term
LotjaGi1g1v0093300.2
n.a. PfkB family carbohydrate kinase; TAIR: AT1G66430.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9C524|SCRK6_ARATH Probable fructokinase-6, chloroplastic; TrEMBL-Plants: tr|C6TGN8|C6TGN8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0093300 LjG1.1_chr1 13665136 13669917 -
2 domain predictions
1 GO term
LotjaGi1g1v0093300.3
n.a. PfkB family carbohydrate kinase; TAIR: AT1G66430.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9C524|SCRK6_ARATH Probable fructokinase-6, chloroplastic; TrEMBL-Plants: tr|A0A0D2PP16|A0A0D2PP16_GOSRA Uncharacterized protein; Found in the gene: LotjaGi1g1v0093300 LjG1.1_chr1 13665136 13670033 -
2 domain predictions
1 GO term
LotjaGi1g1v0093300.4
n.a. PfkB family carbohydrate kinase; TAIR: AT1G66430.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9C524|SCRK6_ARATH Probable fructokinase-6, chloroplastic; TrEMBL-Plants: tr|A0A0D2PP16|A0A0D2PP16_GOSRA Uncharacterized protein; Found in the gene: LotjaGi1g1v0093300 LjG1.1_chr1 13665136 13670042 -
2 domain predictions
1 GO term
LotjaGi1g1v0701600.1
n.a. PfkB family carbohydrate kinase; TAIR: AT4G28706.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9H477|RBSK_HUMAN Ribokinase; TrEMBL-Plants: tr|A0A1J7I8X4|A0A1J7I8X4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0701600 LjG1.1_chr1 127013468 127020014 -
2 domain predictions
1 GO term
LotjaGi1g1v0701700.2
n.a. PfkB family carbohydrate kinase; TAIR: AT4G28706.4 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P32143|SQUV_ECOLI Sulfofructose kinase; TrEMBL-Plants: tr|G7KZI2|G7KZI2_MEDTR PfkB family carbohydrate kinase; Found in the gene: LotjaGi1g1v0701700 LjG1.1_chr1 127021346 127026102 -
2 domain predictions
1 GO term
LotjaGi2g1v0151600.1
n.a. PfkB family carbohydrate kinase; TAIR: AT5G51830.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9FLH8|SCRK7_ARATH Probable fructokinase-7; TrEMBL-Plants: tr|A0A0S3TB44|A0A0S3TB44_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0151600 LjG1.1_chr2 54616075 54620462 -
2 domain predictions
1 GO term
LotjaGi3g1v0033000.1
n.a. PfkB family carbohydrate kinase; TAIR: AT3G59480.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q42896|SCRK2_SOLLC Fructokinase-2; TrEMBL-Plants: tr|I1MD61|I1MD61_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0033000 LjG1.1_chr3 3479065 3487033 -
2 domain predictions
1 GO term
LotjaGi3g1v0257100.1
n.a. Ribokinase; TAIR: AT1G17160.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P44331|RBSK_HAEIN Ribokinase; TrEMBL-Plants: tr|A0A072VK36|A0A072VK36_MEDTR Ribokinase; Found in the gene: LotjaGi3g1v0257100 LjG1.1_chr3 44401174 44413637 +
2 domain predictions
1 GO term
LotjaGi3g1v0499100.1
n.a. PfkB family carbohydrate kinase; TAIR: AT1G06030.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q42896|SCRK2_SOLLC Fructokinase-2; TrEMBL-Plants: tr|I1LJP3|I1LJP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0499100 LjG1.1_chr3 91765471 91768894 +
2 domain predictions
1 GO term
LotjaGi3g1v0499100.2
n.a. PfkB family carbohydrate kinase; TAIR: AT3G59480.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q42896|SCRK2_SOLLC Fructokinase-2; TrEMBL-Plants: tr|I1LJP3|I1LJP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0499100 LjG1.1_chr3 91765829 91768418 +
2 domain predictions
1 GO term
LotjaGi3g1v0541100.1
n.a. Carbohydrate kinase-like protein; TAIR: AT4G27600.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q55480|YZ37_SYNY3 Uncharacterized sugar kinase slr0537; TrEMBL-Plants: tr|G7JSU0|G7JSU0_MEDTR PfkB family carbohydrate kinase; Found in the gene: LotjaGi3g1v0541100 LjG1.1_chr3 95815062 95819647 -
2 domain predictions
1 GO term
LotjaGi4g1v0083600.1
n.a. PfkB family carbohydrate kinase; TAIR: AT1G49350.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P30235|PSUK_ECOLI Pseudouridine kinase; TrEMBL-Plants: tr|A0A072UMB6|A0A072UMB6_MEDTR PfkB family carbohydrate kinase; Found in the gene: LotjaGi4g1v0083600 LjG1.1_chr4 10945145 10960597 +
2 domain predictions
1 GO term
LotjaGi4g1v0083600.3
n.a. PfkB family carbohydrate kinase; TAIR: AT1G49350.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P30235|PSUK_ECOLI Pseudouridine kinase; TrEMBL-Plants: tr|Q2MGQ0|Q2MGQ0_MEDTR Carbohydrate kinase, PfkB; Found in the gene: LotjaGi4g1v0083600 LjG1.1_chr4 10954644 10958673 +
2 domain predictions
1 GO term
LotjaGi4g1v0083600.4
n.a. PfkB family carbohydrate kinase; TAIR: AT1G49350.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P30235|PSUK_ECOLI Pseudouridine kinase; TrEMBL-Plants: tr|Q2MGQ0|Q2MGQ0_MEDTR Carbohydrate kinase, PfkB; Found in the gene: LotjaGi4g1v0083600 LjG1.1_chr4 10954662 10958584 +
2 domain predictions
1 GO term
LotjaGi4g1v0083600.5
n.a. PfkB family carbohydrate kinase; TAIR: AT1G49350.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P30235|PSUK_ECOLI Pseudouridine kinase; TrEMBL-Plants: tr|Q2MGQ0|Q2MGQ0_MEDTR Carbohydrate kinase, PfkB; Found in the gene: LotjaGi4g1v0083600 LjG1.1_chr4 10954662 10958702 +
2 domain predictions
1 GO term
LotjaGi5g1v0151200.1
n.a. PfkB family carbohydrate kinase; TAIR: AT4G28706.2 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P50053|KHK_HUMAN Ketohexokinase; TrEMBL-Plants: tr|V7BFQ5|V7BFQ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0151200 LjG1.1_chr5 39495369 39501800 -
2 domain predictions
1 GO term
LotjaGi5g1v0151500.1
n.a. PfkB family carbohydrate kinase; TAIR: AT4G28706.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q02974|KHK_RAT Ketohexokinase; TrEMBL-Plants: tr|A0A0S3SRQ8|A0A0S3SRQ8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0151500 LjG1.1_chr5 39579801 39585308 -
2 domain predictions
1 GO term
LotjaGi5g1v0151500.2
n.a. PfkB family carbohydrate kinase; TAIR: AT4G28706.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q02974|KHK_RAT Ketohexokinase; TrEMBL-Plants: tr|A0A0S3SRQ8|A0A0S3SRQ8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0151500 LjG1.1_chr5 39580180 39585308 -
2 domain predictions
1 GO term
LotjaGi5g1v0306100.1
n.a. PfkB family carbohydrate kinase; TAIR: AT5G51830.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9FLH8|SCRK7_ARATH Probable fructokinase-7; TrEMBL-Plants: tr|I1NGN6|I1NGN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0306100 LjG1.1_chr5 62411015 62414654 -
2 domain predictions
1 GO term