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IPR002139 is a Ribokinase/fructokinase.
<p>Ribokinases participate in the first step of ribose metabolism, and are members of the superfamily of carbohydrate kinases. Ribokinases phosphorylate ribose to ribose-5-phosphate in the presence of ATP and magnesium [[cite:PUB00005046]]:</p> <p><reaction> ATP + D-Ribose = ADP + D-Ribose-5-Phosphate </reaction></p> <p>The phosphorylated sugar may then enter the pentose phosphate pathway [[cite:PUB00004876]]. There are indications that the phosphorylated sugar may also be used in the synthesis of amino acids (histidine and tryptophan). Further, links to mammalian adenosine kinase have been identified, through sequence similarity, suggesting possible homology [[cite:PUB00004876], [cite:PUB00001470]].</p> <p>This family also includes fructokinases [[cite:PUB00015675]]. Fructokinase may be involved in a sugar-sensing pathway in plants [[cite:PUB00079959], [cite:PUB00079958]].</p> <p>Other proteins included in this entry are: cytidine kinase from Thermococcus kodakarensis [[cite:PUB00097196]], Sulfofructose kinase from Escherichia coli [[cite:PUB00074171]], Pseudouridine kinase from Arabidopsis thaliana [[cite:PUB00100236]], deoxyribokinase [[cite:PUB00153414]] and MJ0406 ([swissprot:Q57849]) from Methanocaldococcus jannaschii. MJ0406 was previously annotated as a 6-phosphofructokinases (PFK), but has since been characterised as a functional nucleoside kinase [[cite:PUB00085020]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: ribokinase-like isoform X2 [Cicer arietinum] gi|502114755|ref|XP_004495042.1| | 13 | ||
– | PREDICTED: ribokinase-like isoform 1 [Glycine max] gi|356556858|ref|XP_003546737.1| | 16 | ||
– | Fructokinase [Medicago truncatula] gi|357500871|ref|XP_003620724.1| | 13 | ||
– | PREDICTED: fructokinase-2-like [Glycine max] gi|356557199|ref|XP_003546905.1| | 12 | ||
– | Carbohydrate kinase-like protein [Medicago truncatula] gi|357474331|ref|XP_003607450.1| | 17 | ||
– | Fructokinase [Medicago truncatula] gi|357444145|ref|XP_003592350.1| | 13 | ||
– | PfkB family carbohydrate kinase; TAIR: AT1G66430.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9C524|SCRK6_ARATH Probable fructokinase-6, chloroplastic; TrEMBL-Plants: tr|C6TGN8|C6TGN8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0093300 | 19 | ||
– | PfkB family carbohydrate kinase; TAIR: AT1G66430.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9C524|SCRK6_ARATH Probable fructokinase-6, chloroplastic; TrEMBL-Plants: tr|C6TGN8|C6TGN8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0093300 | 19 | ||
– | PfkB family carbohydrate kinase; TAIR: AT1G66430.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9C524|SCRK6_ARATH Probable fructokinase-6, chloroplastic; TrEMBL-Plants: tr|A0A0D2PP16|A0A0D2PP16_GOSRA Uncharacterized protein; Found in the gene: LotjaGi1g1v0093300 | 13 | ||
– | PfkB family carbohydrate kinase; TAIR: AT1G66430.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9C524|SCRK6_ARATH Probable fructokinase-6, chloroplastic; TrEMBL-Plants: tr|A0A0D2PP16|A0A0D2PP16_GOSRA Uncharacterized protein; Found in the gene: LotjaGi1g1v0093300 | 13 | ||
– | PfkB family carbohydrate kinase; TAIR: AT4G28706.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9H477|RBSK_HUMAN Ribokinase; TrEMBL-Plants: tr|A0A1J7I8X4|A0A1J7I8X4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0701600 | 11 | ||
– | PfkB family carbohydrate kinase; TAIR: AT4G28706.4 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P32143|SQUV_ECOLI Sulfofructose kinase; TrEMBL-Plants: tr|G7KZI2|G7KZI2_MEDTR PfkB family carbohydrate kinase; Found in the gene: LotjaGi1g1v0701700 | 15 | ||
– | PfkB family carbohydrate kinase; TAIR: AT5G51830.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9FLH8|SCRK7_ARATH Probable fructokinase-7; TrEMBL-Plants: tr|A0A0S3TB44|A0A0S3TB44_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0151600 | 13 | ||
– | PfkB family carbohydrate kinase; TAIR: AT3G59480.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q42896|SCRK2_SOLLC Fructokinase-2; TrEMBL-Plants: tr|I1MD61|I1MD61_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0033000 | 12 | ||
– | Ribokinase; TAIR: AT1G17160.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P44331|RBSK_HAEIN Ribokinase; TrEMBL-Plants: tr|A0A072VK36|A0A072VK36_MEDTR Ribokinase; Found in the gene: LotjaGi3g1v0257100 | 15 | ||
– | PfkB family carbohydrate kinase; TAIR: AT1G06030.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q42896|SCRK2_SOLLC Fructokinase-2; TrEMBL-Plants: tr|I1LJP3|I1LJP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0499100 | 13 | ||
– | PfkB family carbohydrate kinase; TAIR: AT3G59480.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q42896|SCRK2_SOLLC Fructokinase-2; TrEMBL-Plants: tr|I1LJP3|I1LJP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0499100 | 13 | ||
– | Carbohydrate kinase-like protein; TAIR: AT4G27600.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q55480|YZ37_SYNY3 Uncharacterized sugar kinase slr0537; TrEMBL-Plants: tr|G7JSU0|G7JSU0_MEDTR PfkB family carbohydrate kinase; Found in the gene: LotjaGi3g1v0541100 | 19 | ||
– | PfkB family carbohydrate kinase; TAIR: AT1G49350.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P30235|PSUK_ECOLI Pseudouridine kinase; TrEMBL-Plants: tr|A0A072UMB6|A0A072UMB6_MEDTR PfkB family carbohydrate kinase; Found in the gene: LotjaGi4g1v0083600 | 11 | ||
– | PfkB family carbohydrate kinase; TAIR: AT1G49350.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P30235|PSUK_ECOLI Pseudouridine kinase; TrEMBL-Plants: tr|Q2MGQ0|Q2MGQ0_MEDTR Carbohydrate kinase, PfkB; Found in the gene: LotjaGi4g1v0083600 | 11 | ||
– | PfkB family carbohydrate kinase; TAIR: AT1G49350.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P30235|PSUK_ECOLI Pseudouridine kinase; TrEMBL-Plants: tr|Q2MGQ0|Q2MGQ0_MEDTR Carbohydrate kinase, PfkB; Found in the gene: LotjaGi4g1v0083600 | 11 | ||
– | PfkB family carbohydrate kinase; TAIR: AT1G49350.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P30235|PSUK_ECOLI Pseudouridine kinase; TrEMBL-Plants: tr|Q2MGQ0|Q2MGQ0_MEDTR Carbohydrate kinase, PfkB; Found in the gene: LotjaGi4g1v0083600 | 11 | ||
– | PfkB family carbohydrate kinase; TAIR: AT4G28706.2 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P50053|KHK_HUMAN Ketohexokinase; TrEMBL-Plants: tr|V7BFQ5|V7BFQ5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0151200 | 11 | ||
– | PfkB family carbohydrate kinase; TAIR: AT4G28706.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q02974|KHK_RAT Ketohexokinase; TrEMBL-Plants: tr|A0A0S3SRQ8|A0A0S3SRQ8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0151500 | 12 | ||
– | PfkB family carbohydrate kinase; TAIR: AT4G28706.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q02974|KHK_RAT Ketohexokinase; TrEMBL-Plants: tr|A0A0S3SRQ8|A0A0S3SRQ8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0151500 | 10 | ||
– | PfkB family carbohydrate kinase; TAIR: AT5G51830.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9FLH8|SCRK7_ARATH Probable fructokinase-7; TrEMBL-Plants: tr|I1NGN6|I1NGN6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0306100 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd01167 | CDD | 1 | 3.85 |