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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0223539 |
| Transcript ID | Lj0g3v0223539.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable sulfate transporter 3.3-like [Glycine max] gi|356575898|ref|XP_003556073.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 112 | 112 | – | – | |
| PANTHER | 3 | 644 | 642 | 0 | ||
| PANTHER | 3 | 644 | 642 | 0 | ||
| TIGRFAM | 73 | 634 | 562 | 3.00E-175 | ||
| Pfam | 86 | 466 | 381 | 7.70E-121 | ||
| Phobius | 113 | 132 | 20 | – | – | |
| Phobius | 133 | 137 | 5 | – | – | |
| Phobius | 138 | 154 | 17 | – | – | |
| Phobius | 155 | 165 | 11 | – | – | |
| TMHMM | 165 | 187 | 23 | – | – | |
| Phobius | 166 | 190 | 25 | – | – | |
| Phobius | 191 | 195 | 5 | – | – | |
| TMHMM | 192 | 214 | 23 | – | – | |
| Phobius | 196 | 215 | 20 | – | – | |
| Phobius | 216 | 221 | 6 | – | – | |
| TMHMM | 221 | 238 | 18 | – | – | |
| Phobius | 222 | 241 | 20 | – | – | |
| Phobius | 242 | 246 | 5 | – | – | |
| Phobius | 247 | 264 | 18 | – | – | |
| TMHMM | 248 | 270 | 23 | – | – | |
| Phobius | 265 | 275 | 11 | – | – | |
| TMHMM | 275 | 297 | 23 | – | – | |
| Phobius | 276 | 297 | 22 | – | – | |
| Phobius | 298 | 367 | 70 | – | – | |
| TMHMM | 368 | 390 | 23 | – | – | |
| Phobius | 368 | 391 | 24 | – | – | |
| Phobius | 392 | 402 | 11 | – | – | |
| TMHMM | 403 | 422 | 20 | – | – | |
| Phobius | 403 | 425 | 23 | – | – | |
| Phobius | 426 | 430 | 5 | – | – | |
| Phobius | 431 | 454 | 24 | – | – | |
| TMHMM | 432 | 454 | 23 | – | – | |
| Phobius | 455 | 460 | 6 | – | – | |
| TMHMM | 461 | 483 | 23 | – | – | |
| Phobius | 461 | 489 | 29 | – | – | |
| Phobius | 490 | 644 | 155 | – | – | |
| ProSiteProfiles | 517 | 638 | 122 | 25.414 | ||
| CDD | 518 | 631 | 114 | 3.97E-20 | – | |
| Pfam | 519 | 634 | 116 | 4.30E-29 | ||
| SUPERFAMILY | 523 | 638 | 116 | 2.94E-14 | ||
| Gene3D | 523 | 639 | 117 | 3.20E-17 | ||
| Coils | 605 | 625 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0223539.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0223539.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.