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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0235009 |
| Transcript ID | Lj0g3v0235009.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like isoform X1 [Cicer arietinum] gi|502123558|ref|XP_004498166.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 421 | 421 | – | – | |
| ProSiteProfiles | 9 | 44 | 36 | 5.7 | ||
| ProSiteProfiles | 57 | 92 | 36 | 8.988 | ||
| PANTHER | 61 | 353 | 293 | 2.30E-79 | – | |
| PANTHER | 61 | 353 | 293 | 2.30E-79 | – | |
| ProSiteProfiles | 96 | 132 | 37 | 10.501 | ||
| Pfam | 99 | 145 | 47 | 2.30E-12 | ||
| TIGRFAM | 112 | 133 | 22 | 4.10E-04 | ||
| ProSiteProfiles | 133 | 168 | 36 | 11.762 | ||
| TIGRFAM | 135 | 169 | 35 | 5.90E-05 | ||
| Pfam | 176 | 224 | 49 | 2.50E-13 | ||
| ProSiteProfiles | 177 | 211 | 35 | 12.934 | ||
| TIGRFAM | 179 | 212 | 34 | 2.70E-10 | ||
| ProSiteProfiles | 212 | 248 | 37 | 8.769 | ||
| TIGRFAM | 214 | 238 | 25 | 0.0019 | ||
| ProSiteProfiles | 266 | 300 | 35 | 9.208 | ||
| TIGRFAM | 268 | 295 | 28 | 0.0024 | ||
| Pfam | 268 | 295 | 28 | 0.051 | ||
| PANTHER | 370 | 506 | 137 | 2.30E-79 | – | |
| PANTHER | 370 | 506 | 137 | 2.30E-79 | – | |
| ProSiteProfiles | 393 | 429 | 37 | 7.772 | ||
| Phobius | 422 | 441 | 20 | – | – | |
| Phobius | 442 | 511 | 70 | – | – | |
| Coils | 468 | 488 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0235009.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0235009.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.