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Lj0g3v0235799.1

Overview

Field Value
Gene ID Lj0g3v0235799
Transcript ID Lj0g3v0235799.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: adenylyl cyclase-associated protein-like [Cicer arietinum] gi|502149183|ref|XP_004507425.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF101278
2 188 187 6.93E-51
IPR013992
Pfam
PF01213
3 242 240 1.20E-71
IPR013992
PANTHER
PTHR10652:SF12
5 422 418 1.70E-233 –
PANTHER
PTHR10652
5 422 418 1.70E-233
IPR001837
MobiDBLite
mobidb-lite
169 206 38 – –
MobiDBLite
mobidb-lite
223 262 40 – –
Gene3D
G3DSA:2.160.20.70
258 420 163 5.60E-64
IPR016098
Pfam
PF08603
262 419 158 3.80E-58
IPR013912
SUPERFAMILY
SSF69340
262 421 160 7.59E-57
IPR013912
ProSiteProfiles
PS51329
262 399 138 42.33
IPR017901
SMART
SM00673
300 337 38 3.30E-11
IPR006599
SMART
SM00673
338 375 38 6.00E-09
IPR006599

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000902
Biological process Cell morphogenesis The developmental process in which the size or shape of a cell is generated and organized.
Subterm of
GO:0003779
Molecular function Actin binding Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
Subterm of
GO:0007010
Biological process Cytoskeleton organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj0g3v0235799.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0235799.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.