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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0235859 |
| Transcript ID | Lj0g3v0235859.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial-like [Glycine max] gi|356557876|ref|XP_003547236.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 14 | 41 | 28 | 4.10E-04 | – | |
| PANTHER | 63 | 158 | 96 | 6.60E-124 | – | |
| PANTHER | 63 | 158 | 96 | 6.60E-124 | – | |
| ProSiteProfiles | 97 | 127 | 31 | 8.407 | ||
| TIGRFAM | 101 | 129 | 29 | 0.0021 | ||
| Pfam | 102 | 128 | 27 | 0.0051 | ||
| Gene3D | 106 | 208 | 103 | 1.80E-05 | ||
| ProSiteProfiles | 128 | 162 | 35 | 11.4 | ||
| TIGRFAM | 130 | 158 | 29 | 5.00E-06 | ||
| Pfam | 130 | 159 | 30 | 4.40E-08 | ||
| TIGRFAM | 161 | 195 | 35 | 1.60E-07 | ||
| Pfam | 161 | 190 | 30 | 2.30E-05 | ||
| ProSiteProfiles | 163 | 193 | 31 | 7.903 | ||
| PANTHER | 190 | 330 | 141 | 6.60E-124 | – | |
| PANTHER | 190 | 330 | 141 | 6.60E-124 | – | |
| ProSiteProfiles | 194 | 228 | 35 | 6.171 | ||
| ProSiteProfiles | 260 | 290 | 31 | 9.964 | ||
| Gene3D | 263 | 319 | 57 | 1.80E-05 | ||
| TIGRFAM | 263 | 292 | 30 | 8.00E-08 | ||
| Pfam | 291 | 329 | 39 | 8.20E-11 | ||
| ProSiteProfiles | 291 | 325 | 35 | 12.682 | ||
| TIGRFAM | 293 | 327 | 35 | 4.50E-09 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0235859.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0235859.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.