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Lj0g3v0244709.1

Overview

Field Value
Gene ID Lj0g3v0244709
Transcript ID Lj0g3v0244709.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: septum-promoting GTP-binding protein 1-like [Glycine max] gi|356501505|ref|XP_003519565.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS51419
1 154 154 9.55 –
PANTHER
PTHR24073
2 148 147 1.80E-93 –
PANTHER
PTHR24073:SF515
2 148 147 1.80E-93 –
SUPERFAMILY
SSF52540
3 145 143 2.65E-23
IPR027417
Gene3D
G3DSA:3.40.50.300
4 136 133 3.80E-23
IPR027417
SMART
SM00175
5 137 133 0.0081 –
Pfam
PF00071
5 134 130 5.10E-17
IPR001806
SMART
SM00174
10 136 127 0.0098 –
PRINTS
PR00449
11 33 23 5.80E-06 –
PRINTS
PR00449
72 85 14 5.80E-06 –
PRINTS
PR00449
112 134 23 5.80E-06 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj0g3v0244709.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0244709.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.