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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0252099 |
| Transcript ID | Lj0g3v0252099.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine max] gi|356549743|ref|XP_003543250.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 137 | 137 | 4.00E-59 | – | |
| Gene3D | 2 | 151 | 150 | 6.30E-33 | ||
| SUPERFAMILY | 2 | 155 | 154 | 4.42E-32 | ||
| Pfam | 20 | 76 | 57 | 5.10E-07 | ||
| SMART | 40 | 63 | 24 | 0.12 | ||
| ProSiteProfiles | 42 | 63 | 22 | 6.834 | ||
| SMART | 64 | 85 | 22 | 190 | ||
| ProSiteProfiles | 65 | 86 | 22 | 6.549 | ||
| SMART | 86 | 109 | 24 | 0.58 | ||
| ProSiteProfiles | 88 | 109 | 22 | 6.226 | ||
| Pfam | 88 | 144 | 57 | 3.50E-08 | ||
| SMART | 110 | 130 | 21 | 69 | ||
| ProSiteProfiles | 110 | 131 | 22 | 7.096 | ||
| PRINTS | 111 | 124 | 14 | 2.70E-06 | – | |
| SMART | 131 | 154 | 24 | 0.41 | ||
| ProSiteProfiles | 133 | 154 | 22 | 6.218 | ||
| SUPERFAMILY | 193 | 390 | 198 | 7.94E-41 | ||
| Gene3D | 193 | 313 | 121 | 2.60E-29 | ||
| SMART | 213 | 235 | 23 | 75 | ||
| ProSiteProfiles | 214 | 235 | 22 | 6.064 | ||
| PANTHER | 219 | 302 | 84 | 4.00E-59 | – | |
| SMART | 236 | 258 | 23 | 72 | ||
| ProSiteProfiles | 237 | 258 | 22 | 7.458 | ||
| SMART | 259 | 282 | 24 | 0.037 | ||
| Pfam | 261 | 317 | 57 | 9.00E-09 | ||
| ProSiteProfiles | 261 | 282 | 22 | 6.672 | ||
| SMART | 283 | 306 | 24 | 210 | ||
| ProSiteProfiles | 285 | 305 | 21 | 5.648 | ||
| SMART | 307 | 329 | 23 | 110 | ||
| Gene3D | 314 | 391 | 78 | 6.40E-21 | ||
| PANTHER | 318 | 392 | 75 | 4.00E-59 | – | |
| SMART | 330 | 352 | 23 | 5.3 | ||
| ProSiteProfiles | 332 | 354 | 23 | 7.235 | ||
| Pfam | 332 | 390 | 59 | 6.20E-10 | ||
| PRINTS | 353 | 366 | 14 | 2.70E-06 | – | |
| SMART | 353 | 376 | 24 | 0.0034 | ||
| ProSiteProfiles | 355 | 376 | 22 | 8.497 | ||
| ProSiteProfiles | 379 | 392 | 14 | 5.687 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0252099.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0252099.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.