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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0252099 |
| Transcript ID | Lj0g3v0252099.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine max] gi|356549743|ref|XP_003543250.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 4 | 79 | 76 | 1.70E-16 | ||
| SUPERFAMILY | 4 | 184 | 181 | 1.74E-37 | ||
| PANTHER | 8 | 166 | 159 | 9.20E-64 | – | |
| SMART | 22 | 45 | 24 | 68 | ||
| ProSiteProfiles | 24 | 45 | 22 | 5.879 | ||
| Pfam | 49 | 105 | 57 | 5.60E-07 | ||
| SMART | 69 | 92 | 24 | 0.12 | ||
| ProSiteProfiles | 71 | 92 | 22 | 6.834 | ||
| Gene3D | 80 | 192 | 113 | 6.70E-24 | ||
| SMART | 93 | 114 | 22 | 190 | ||
| ProSiteProfiles | 94 | 115 | 22 | 6.549 | ||
| SMART | 115 | 138 | 24 | 0.58 | ||
| Pfam | 117 | 173 | 57 | 2.40E-08 | ||
| ProSiteProfiles | 117 | 138 | 22 | 6.226 | ||
| SMART | 139 | 159 | 21 | 69 | ||
| ProSiteProfiles | 139 | 160 | 22 | 7.096 | ||
| PRINTS | 140 | 153 | 14 | 3.00E-06 | – | |
| SMART | 160 | 183 | 24 | 0.41 | ||
| ProSiteProfiles | 162 | 183 | 22 | 6.218 | ||
| Gene3D | 222 | 344 | 123 | 2.40E-29 | ||
| SUPERFAMILY | 222 | 419 | 198 | 9.64E-41 | ||
| SMART | 242 | 264 | 23 | 75 | ||
| ProSiteProfiles | 243 | 264 | 22 | 6.064 | ||
| PANTHER | 248 | 331 | 84 | 9.20E-64 | – | |
| SMART | 265 | 287 | 23 | 72 | ||
| ProSiteProfiles | 266 | 287 | 22 | 7.458 | ||
| SMART | 288 | 311 | 24 | 0.037 | ||
| ProSiteProfiles | 290 | 311 | 22 | 6.672 | ||
| Pfam | 290 | 346 | 57 | 1.00E-08 | ||
| SMART | 312 | 335 | 24 | 210 | ||
| ProSiteProfiles | 314 | 334 | 21 | 5.648 | ||
| SMART | 336 | 358 | 23 | 110 | ||
| Gene3D | 345 | 420 | 76 | 4.50E-19 | ||
| PANTHER | 347 | 421 | 75 | 9.20E-64 | – | |
| SMART | 359 | 381 | 23 | 5.3 | ||
| ProSiteProfiles | 361 | 383 | 23 | 7.235 | ||
| Pfam | 361 | 419 | 59 | 6.60E-10 | ||
| SMART | 382 | 405 | 24 | 0.0034 | ||
| PRINTS | 382 | 395 | 14 | 3.00E-06 | – | |
| ProSiteProfiles | 384 | 405 | 22 | 8.497 | ||
| ProSiteProfiles | 408 | 421 | 14 | 5.687 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0252099.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0252099.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.