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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0252919 |
| Transcript ID | Lj0g3v0252919.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sucrose transport protein SUC3-like [Cicer arietinum] gi|502158634|ref|XP_004511224.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 332 | 332 | 3.70E-303 | ||
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 1 | 332 | 332 | 3.70E-303 | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| Phobius | 2 | 13 | 12 | – | – | |
| Phobius | 14 | 20 | 7 | – | – | |
| Phobius | 21 | 118 | 98 | – | – | |
| TMHMM | 36 | 58 | 23 | – | – | |
| Gene3D | 37 | 142 | 106 | 1.10E-05 | – | |
| SUPERFAMILY | 37 | 154 | 118 | 2.88E-19 | ||
| TMHMM | 73 | 95 | 23 | – | – | |
| TMHMM | 116 | 138 | 23 | – | – | |
| Phobius | 119 | 139 | 21 | – | – | |
| Phobius | 140 | 231 | 92 | – | – | |
| MobiDBLite | 157 | 186 | 30 | – | – | |
| SUPERFAMILY | 213 | 448 | 236 | 2.88E-19 | ||
| TMHMM | 231 | 253 | 23 | – | – | |
| Phobius | 232 | 253 | 22 | – | – | |
| Phobius | 254 | 283 | 30 | – | – | |
| TMHMM | 284 | 303 | 20 | – | – | |
| Phobius | 284 | 302 | 19 | – | – | |
| Phobius | 303 | 313 | 11 | – | – | |
| TMHMM | 313 | 335 | 23 | – | – | |
| Phobius | 314 | 336 | 23 | – | – | |
| Phobius | 337 | 355 | 19 | – | – | |
| PANTHER | 353 | 455 | 103 | 3.70E-303 | – | |
| PANTHER | 353 | 455 | 103 | 3.70E-303 | ||
| TMHMM | 356 | 378 | 23 | – | – | |
| Phobius | 356 | 381 | 26 | – | – | |
| Phobius | 382 | 392 | 11 | – | – | |
| Phobius | 393 | 413 | 21 | – | – | |
| TMHMM | 393 | 415 | 23 | – | – | |
| Phobius | 414 | 424 | 11 | – | – | |
| TMHMM | 422 | 444 | 23 | – | – | |
| Phobius | 425 | 446 | 22 | – | – | |
| Phobius | 447 | 462 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Sucrose transmembrane transporter activity | Enables the transfer of sucrose from one side of a membrane to the other. Sucrose is the disaccharide O-beta-D-fructofuranosyl-(2->1)-alpha-D-glucopyranoside, a sweet-tasting, non-reducing sugar isolated industrially from sugar beet or sugar cane. | ||
| Biological process | Sucrose transport | The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0252919.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0252919.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.