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Lj0g3v0259009.2

Overview

Field Value
Gene ID Lj0g3v0259009
Transcript ID Lj0g3v0259009.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468521|ref|XP_003604545.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11017
1 503 503 2.20E-271 –
SUPERFAMILY
SSF52540
1 224 224 6.86E-51
IPR027417
PANTHER
PTHR11017:SF163
1 503 503 2.20E-271 –
Pfam
PF00931
1 242 242 8.60E-32
IPR002182
Gene3D
G3DSA:3.40.50.300
2 147 146 1.30E-08
IPR027417
PRINTS
PR00364
70 84 15 1.20E-11 –
PRINTS
PR00364
165 179 15 1.20E-11 –
SUPERFAMILY
SSF46785
201 290 90 2.12E-07
IPR011991
SUPERFAMILY
SSF52058
326 588 263 5.61E-42
IPR032675
Gene3D
G3DSA:3.80.10.10
333 588 256 7.80E-37
IPR032675
PRINTS
PR00364
457 473 17 1.20E-11 –
PANTHER
PTHR11017
541 798 258 2.20E-271 –
PANTHER
PTHR11017:SF163
541 798 258 2.20E-271 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0043531
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.
Subterm of

Genome browser

LORE1 insertions 9

Expression data

Expression pattern

Expression pattern of Lj0g3v0259009.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0259009.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.