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Lj0g3v0267779.1

Overview

Field Value
Gene ID Lj0g3v0267779
Transcript ID Lj0g3v0267779.1
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 343 343 2.70E-197
PANTHER 1 343 343 2.70E-197
Pfam 2 81 80 3.30E-07
SUPERFAMILY 2 70 69 5.84E-15
PRINTS 11 25 15 5.10E-07
SUPERFAMILY 47 154 108 1.85E-24
SUPERFAMILY 130 382 253 9.35E-33
Gene3D 162 377 216 5.50E-21
PRINTS 320 336 17 5.10E-07
SUPERFAMILY 435 526 92 9.35E-33
Gene3D 437 523 87 2.00E-07
PANTHER 476 683 208 2.70E-197
PANTHER 476 683 208 2.70E-197

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ADP binding Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate.

Expression data

Expression pattern

Expression pattern of Lj0g3v0267779.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0267779.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.