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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0278949 |
| Transcript ID | Lj0g3v0278949.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: homeobox-leucine zipper protein ATHB-8-like [Glycine max] gi|356507931|ref|XP_003522716.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 114 | 114 | 3.70E-69 | – | |
| Phobius | 1 | 285 | 285 | – | – | |
| PANTHER | 1 | 114 | 114 | 3.70E-69 | – | |
| Gene3D | 5 | 79 | 75 | 2.40E-19 | ||
| ProSiteProfiles | 16 | 80 | 65 | 15.516 | ||
| SMART | 18 | 84 | 67 | 1.70E-15 | ||
| SUPERFAMILY | 20 | 82 | 63 | 1.63E-17 | ||
| CDD | 21 | 81 | 61 | 3.29E-16 | – | |
| Pfam | 22 | 79 | 58 | 8.70E-17 | ||
| CDD | 73 | 112 | 40 | 5.04E-06 | – | |
| Coils | 86 | 117 | 32 | – | – | |
| MobiDBLite | 132 | 158 | 27 | – | – | |
| ProSiteProfiles | 155 | 291 | 137 | 12.572 | ||
| SUPERFAMILY | 156 | 292 | 137 | 5.49E-19 | – | |
| Gene3D | 164 | 291 | 128 | 8.10E-09 | ||
| Pfam | 165 | 291 | 127 | 3.40E-27 | ||
| Phobius | 286 | 303 | 18 | – | – | |
| Phobius | 304 | 304 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of Lj0g3v0278949.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0278949.1, powered by CORGI.
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