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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0281719 |
| Transcript ID | Lj0g3v0281719.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like [Cicer arietinum] gi|502169493|ref|XP_004514619.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 220 | 220 | 8.90E-296 | – | |
| PANTHER | 1 | 220 | 220 | 8.90E-296 | ||
| Pfam | 12 | 49 | 38 | 1.00E-09 | ||
| Pfam | 58 | 166 | 109 | 1.10E-05 | ||
| PANTHER | 247 | 817 | 571 | 8.90E-296 | – | |
| PANTHER | 247 | 817 | 571 | 8.90E-296 | ||
| Gene3D | 395 | 629 | 235 | 2.40E-44 | ||
| SUPERFAMILY | 407 | 792 | 386 | 1.91E-55 | ||
| Pfam | 408 | 497 | 90 | 1.20E-15 | – | |
| Pfam | 511 | 573 | 63 | 8.30E-17 | – | |
| Pfam | 584 | 784 | 201 | 6.60E-46 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 5'-flap endonuclease activity | Catalysis of the cleavage of a 5' flap structure in DNA, but not other DNA structures; processes the 5' ends of Okazaki fragments in lagging strand DNA synthesis. | ||
| Molecular function | Single-stranded DNA-dependent ATP-dependent DNA helicase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix. | ||
| Biological process | DNA replication, Okazaki fragment processing | The DNA metabolic process, occurring during lagging strand synthesis, by which RNA primers are removed from Okazaki fragments, the resulting gaps filled by DNA polymerization, and the ends ligated to form a continuous strand. |
Expression pattern of Lj0g3v0281719.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0281719.1, powered by CORGI.
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