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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0283739 |
| Transcript ID | Lj0g3v0283739.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable peptide/nitrate transporter At1g27040-like [Cicer arietinum] gi|502132975|ref|XP_004501602.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 34 | 34 | – | – | |
| PANTHER | 5 | 572 | 568 | 0 | ||
| PANTHER | 5 | 572 | 568 | 0 | – | |
| SUPERFAMILY | 10 | 113 | 104 | 1.18E-18 | ||
| Gene3D | 20 | 231 | 212 | 8.00E-13 | – | |
| TMHMM | 22 | 44 | 23 | – | – | |
| CDD | 22 | 225 | 204 | 7.05E-04 | ||
| Phobius | 35 | 54 | 20 | – | – | |
| Phobius | 55 | 65 | 11 | – | – | |
| TMHMM | 59 | 81 | 23 | – | – | |
| Phobius | 66 | 86 | 21 | – | – | |
| Phobius | 87 | 91 | 5 | – | – | |
| Pfam | 88 | 515 | 428 | 2.20E-88 | ||
| TMHMM | 90 | 112 | 23 | – | – | |
| Phobius | 92 | 111 | 20 | – | – | |
| Phobius | 112 | 180 | 69 | – | – | |
| TMHMM | 138 | 160 | 23 | – | – | |
| SUPERFAMILY | 141 | 240 | 100 | 1.18E-18 | ||
| Phobius | 181 | 203 | 23 | – | – | |
| TMHMM | 181 | 203 | 23 | – | – | |
| Phobius | 204 | 208 | 5 | – | – | |
| TMHMM | 208 | 230 | 23 | – | – | |
| Phobius | 209 | 230 | 22 | – | – | |
| Phobius | 231 | 326 | 96 | – | – | |
| SUPERFAMILY | 321 | 564 | 244 | 1.18E-18 | ||
| Phobius | 327 | 348 | 22 | – | – | |
| TMHMM | 328 | 350 | 23 | – | – | |
| Phobius | 349 | 367 | 19 | – | – | |
| Phobius | 368 | 388 | 21 | – | – | |
| TMHMM | 370 | 392 | 23 | – | – | |
| Phobius | 389 | 408 | 20 | – | – | |
| Phobius | 409 | 429 | 21 | – | – | |
| TMHMM | 412 | 429 | 18 | – | – | |
| Phobius | 430 | 457 | 28 | – | – | |
| TMHMM | 458 | 480 | 23 | – | – | |
| Phobius | 458 | 480 | 23 | – | – | |
| Phobius | 481 | 491 | 11 | – | – | |
| Phobius | 492 | 512 | 21 | – | – | |
| TMHMM | 493 | 512 | 20 | – | – | |
| Phobius | 513 | 531 | 19 | – | – | |
| TMHMM | 532 | 554 | 23 | – | – | |
| Phobius | 532 | 555 | 24 | – | – | |
| Phobius | 556 | 576 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0283739.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0283739.1, powered by CORGI.
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