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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0284549 |
| Transcript ID | Lj0g3v0284549.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: subtilisin-like protease-like [Glycine max] gi|356529989|ref|XP_003533568.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 1 | 25 | 25 | – | – | |
| SignalP | 1 | 29 | 29 | – | – | |
| SignalP | 1 | 29 | 29 | – | – | |
| PANTHER | 7 | 308 | 302 | 4.40E-142 | – | |
| SUPERFAMILY | 7 | 168 | 162 | 3.80E-30 | ||
| TMHMM | 7 | 29 | 23 | – | – | |
| PANTHER | 7 | 308 | 302 | 4.40E-142 | ||
| Phobius | 7 | 18 | 12 | – | – | |
| Phobius | 19 | 25 | 7 | – | – | |
| Phobius | 26 | 335 | 310 | – | – | |
| Gene3D | 30 | 101 | 72 | 9.70E-04 | ||
| Pfam | 34 | 118 | 85 | 6.50E-15 | ||
| Gene3D | 102 | 168 | 67 | 2.30E-30 | ||
| Pfam | 147 | 309 | 163 | 3.00E-12 | ||
| Gene3D | 205 | 309 | 105 | 2.30E-30 | ||
| SUPERFAMILY | 220 | 316 | 97 | 3.80E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj0g3v0284549.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0284549.2, powered by CORGI.
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