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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR010259
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 121 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 6.788s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0004409.1
n.a. PREDICTED: xylem serine proteinase 1-like [Cicer arietinum] gi|502157799|ref|XP_004510915.1| chr0 1613120 1616133 +
2 domain predictions
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Lj0g3v0072829.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357462409|ref|XP_003601486.1| chr0 27130021 27142128 +
3 domain predictions
 –
Lj0g3v0091339.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357453673|ref|XP_003597117.1| chr0 37827665 37829782 +
3 domain predictions
 –
Lj0g3v0097479.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502152770|ref|XP_004509085.1| chr0 41212817 41213302 -
2 domain predictions
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Lj0g3v0131589.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357453673|ref|XP_003597117.1| chr0 59878588 59879397 +
3 domain predictions
 –
Lj0g3v0171039.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356559732|ref|XP_003548151.1| chr0 81877511 81880268 -
3 domain predictions
 –
Lj0g3v0207979.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502168000|ref|XP_004514295.1| chr0 104063311 104069241 +
3 domain predictions
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Lj0g3v0252179.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502176589|ref|XP_004515893.1| chr0 130742193 130743114 -
3 domain predictions
 –
Lj0g3v0255389.1
n.a. PREDICTED: xylem serine proteinase 1-like [Cicer arietinum] gi|502157799|ref|XP_004510915.1| chr0 132680509 132683522 +
2 domain predictions
 –
Lj0g3v0284549.2
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356529989|ref|XP_003533568.1| chr0 147640907 147651875 -
3 domain predictions
 –
Lj0g3v0335989.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357507043|ref|XP_003623810.1| chr0 176023414 176025776 -
2 domain predictions
 –
Lj0g3v0339229.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356500305|ref|XP_003518973.1| chr0 177684904 177692715 +
2 domain predictions
 –
Lj0g3v0343309.1
n.a. PREDICTED: subtilisin-like protease-like isoform X1 [Cicer arietinum] gi|502140324|ref|XP_004504167.1| chr0 179972235 179975378 +
2 domain predictions
 –
Lj0g3v0345599.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356509291|ref|XP_003523384.1| chr0 181290464 181291520 -
3 domain predictions
 –
Lj0g3v0354679.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357453673|ref|XP_003597117.1| chr0 186832541 186834270 +
3 domain predictions
 –
Lj1g3v2608130.1
n.a. PREDICTED: xylem serine proteinase 1-like [Cicer arietinum] gi|502104881|ref|XP_004492669.1| chr1 30089689 30094881 +
3 domain predictions
 –
Lj1g3v2808050.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356568457|ref|XP_003552427.1| chr1 31846981 31848217 +
2 domain predictions
 –
Lj1g3v2808060.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356568457|ref|XP_003552427.1| chr1 31846981 31848834 +
2 domain predictions
 –
Lj1g3v2921640.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502106343|ref|XP_004492921.1| chr1 32804018 32822825 -
3 domain predictions
 –
Lj1g3v2921640.2
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502106343|ref|XP_004492921.1| chr1 32815712 32822825 -
3 domain predictions
 –
Lj1g3v4528380.1
n.a. Subtilisin-like protease [Medicago truncatula] gi|357510203|ref|XP_003625390.1| chr1 53301536 53304674 -
3 domain predictions
 –
Lj1g3v4667840.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356535933|ref|XP_003536496.1| chr1 55305206 55308704 +
3 domain predictions
 –
Lj1g3v4667850.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356535933|ref|XP_003536496.1| chr1 55305206 55307800 +
3 domain predictions
 –
Lj1g3v4703040.1
n.a. Xylem serine proteinase [Medicago truncatula] gi|357510987|ref|XP_003625782.1| chr1 56138186 56139326 -
2 domain predictions
 –
Lj1g3v5021140.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356571210|ref|XP_003553772.1| chr1 61244706 61246187 +
2 domain predictions
 –
Lj2g3v0836920.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356559208|ref|XP_003547892.1| chr2 13026250 13031062 -
3 domain predictions
 –
Lj2g3v0836920.2
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356531311|ref|XP_003534221.1| chr2 13026250 13031062 -
3 domain predictions
 –
Lj2g3v1573060.1
n.a. PREDICTED: subtilisin-like protease-like isoform X1 [Cicer arietinum] gi|502161828|ref|XP_004512297.1| chr2 25014942 25035430 -
3 domain predictions
 –
Lj2g3v2002900.1
n.a. subtilase [Lotus japonicus] gi|163644224|dbj|BAF95755.1| chr2 30541559 30543830 +
2 domain predictions
 –
Lj2g3v2002910.1
n.a. subtilase [Lotus japonicus] gi|163644224|dbj|BAF95755.1| chr2 30547801 30550053 +
2 domain predictions
 –
Lj2g3v2002920.1
n.a. subtilase [Lotus japonicus] gi|163644223|dbj|BAF95754.1| chr2 30552812 30556152 +
2 domain predictions
 –
Lj2g3v2879540.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356553709|ref|XP_003545195.1| chr2 37543694 37544574 -
3 domain predictions
 –
Lj3g3v0200840.1
n.a. subtilase [Lotus japonicus] gi|163644220|dbj|BAF95753.1| chr3 1256136 1258943 -
2 domain predictions
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Lj3g3v0549600.1
n.a. Subtilisin-like serine protease [Medicago truncatula] gi|357512771|ref|XP_003626674.1| chr3 6111654 6115753 +
2 domain predictions
 –
Lj3g3v2505200.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356560237|ref|XP_003548400.1| chr3 30712960 30713388 -
3 domain predictions
 –
Lj3g3v2575850.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502156610|ref|XP_004510560.1| chr3 31387368 31390196 +
2 domain predictions
 –
Lj3g3v2576800.1
n.a. n.a. chr3 31871949 31875140 -
3 domain predictions
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Lj3g3v2995720.1
n.a. subtilase [Lotus japonicus] gi|163914235|dbj|BAF95887.1| chr3 37208090 37213269 +
3 domain predictions
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Lj4g3v1287360.1
n.a. subtilase [Lotus japonicus] gi|163644224|dbj|BAF95755.1| chr4 18987730 18989982 -
2 domain predictions
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Lj4g3v1327500.1
n.a. subtilase [Lotus japonicus] gi|163644220|dbj|BAF95753.1| chr4 19524119 19525705 +
2 domain predictions
 –
Lj4g3v1388200.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502176592|ref|XP_004515894.1| chr4 21250969 21256334 -
3 domain predictions
 –
Lj4g3v2136040.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356562099|ref|XP_003549311.1| chr4 29321518 29327845 -
3 domain predictions
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Lj4g3v2294420.1
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356499137|ref|XP_003518399.1| chr4 31927666 31935072 +
3 domain predictions
 –
Lj4g3v2294420.2
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356499137|ref|XP_003518399.1| chr4 31927666 31931894 +
3 domain predictions
 –
Lj4g3v2578300.1
n.a. PREDICTED: subtilisin-like protease SDD1-like isoform X2 [Cicer arietinum] gi|502140922|ref|XP_004504377.1| chr4 34643686 34647646 +
3 domain predictions
 –
Lj4g3v2578300.2
n.a. PREDICTED: subtilisin-like protease SDD1-like [Glycine max] gi|356510921|ref|XP_003524182.1| chr4 34643686 34647646 +
3 domain predictions
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Lj5g3v0308400.1
n.a. PREDICTED: subtilisin-like protease-like [Cicer arietinum] gi|502125650|ref|XP_004499011.1| chr5 2859229 2864080 -
3 domain predictions
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Lj5g3v1014510.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356520093|ref|XP_003528700.1| chr5 16219242 16221850 +
3 domain predictions
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Lj5g3v1302260.1
n.a. PREDICTED: subtilisin-like protease-like [Glycine max] gi|356533680|ref|XP_003535388.1| chr5 20293472 20296634 -
3 domain predictions
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Lj6g3v1126250.1
n.a. PREDICTED: subtilisin-like protease SDD1-like [Glycine max] gi|356558532|ref|XP_003547559.1| chr6 13810259 13811896 +
3 domain predictions
 –