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Lj0g3v0286759.1

Overview

Field Value
Gene ID Lj0g3v0286759
Transcript ID Lj0g3v0286759.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ADP-ribosylation factor-like protein 8B-like [Cicer arietinum] gi|502096772|ref|XP_004490821.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM00177
1 184 184 3.10E-28 –
PANTHER
PTHR11711
1 180 180 1.10E-148 –
PANTHER
PTHR11711:SF152
1 180 180 1.10E-148 –
SMART
SM00178
8 180 173 1.10E-14 –
Pfam
PF00025
9 178 170 9.50E-45
IPR006689
Gene3D
G3DSA:3.40.50.300
12 178 167 9.30E-52
IPR027417
ProSiteProfiles
PS51417
13 180 168 17.973
IPR024156
SUPERFAMILY
SSF52540
17 179 163 3.04E-45
IPR027417
TIGRFAM
TIGR00231
18 174 157 2.80E-19
IPR005225
SMART
SM00175
20 183 164 4.20E-08 –
CDD
cd04159
21 179 159 9.50E-101 –
PRINTS
PR00328
21 44 24 1.20E-14
IPR006689
PRINTS
PR00328
77 102 26 1.20E-14
IPR006689
PRINTS
PR00328
122 143 22 1.20E-14
IPR006689

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 18

Expression data

Expression pattern

Expression pattern of Lj0g3v0286759.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0286759.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.