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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0287449 |
| Transcript ID | Lj0g3v0287449.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Cicer arietinum] gi|502168201|ref|XP_004514343.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 36 | 497 | 462 | 2.30E-266 | – | |
| PANTHER | 36 | 497 | 462 | 2.30E-266 | – | |
| ProSiteProfiles | 70 | 104 | 35 | 5.656 | ||
| Gene3D | 126 | 342 | 217 | 5.10E-12 | ||
| ProSiteProfiles | 139 | 169 | 31 | 6.533 | ||
| Pfam | 145 | 171 | 27 | 0.073 | ||
| ProSiteProfiles | 173 | 207 | 35 | 9.317 | ||
| Pfam | 177 | 219 | 43 | 3.90E-07 | ||
| TIGRFAM | 177 | 209 | 33 | 1.00E-04 | ||
| ProSiteProfiles | 208 | 242 | 35 | 7.103 | ||
| SUPERFAMILY | 222 | 412 | 191 | 3.66E-07 | – | |
| ProSiteProfiles | 244 | 278 | 35 | 6.917 | ||
| ProSiteProfiles | 279 | 309 | 31 | 7.618 | ||
| Pfam | 281 | 304 | 24 | 0.25 | ||
| ProSiteProfiles | 314 | 348 | 35 | 6.5 | ||
| Pfam | 318 | 344 | 27 | 0.0096 | ||
| ProSiteProfiles | 349 | 383 | 35 | 9.657 | ||
| Pfam | 354 | 380 | 27 | 3.40E-04 | ||
| TIGRFAM | 354 | 384 | 31 | 8.80E-05 | ||
| Gene3D | 382 | 414 | 33 | 5.10E-12 | ||
| ProSiteProfiles | 384 | 414 | 31 | 5.623 | ||
| Pfam | 387 | 410 | 24 | 0.85 | ||
| Coils | 480 | 500 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0287449.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0287449.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.