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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0287689 |
| Transcript ID | Lj0g3v0287689.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable nitrate excretion transporter 2-like [Glycine max] gi|356550204|ref|XP_003543478.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | – | – | |
| MobiDBLite | 1 | 21 | 21 | – | – | |
| PANTHER | 10 | 562 | 553 | 0 | ||
| PANTHER | 10 | 562 | 553 | 0 | – | |
| SUPERFAMILY | 24 | 239 | 216 | 9.29E-19 | ||
| Phobius | 29 | 53 | 25 | – | – | |
| TMHMM | 29 | 51 | 23 | – | – | |
| CDD | 29 | 229 | 201 | 4.04E-04 | ||
| Gene3D | 30 | 234 | 205 | 9.80E-13 | – | |
| Phobius | 54 | 64 | 11 | – | – | |
| Phobius | 65 | 85 | 21 | – | – | |
| Phobius | 86 | 90 | 5 | – | – | |
| Phobius | 91 | 111 | 21 | – | – | |
| TMHMM | 93 | 115 | 23 | – | – | |
| Pfam | 95 | 520 | 426 | 4.50E-65 | ||
| Phobius | 112 | 177 | 66 | – | – | |
| TMHMM | 135 | 157 | 23 | – | – | |
| Phobius | 178 | 200 | 23 | – | – | |
| TMHMM | 178 | 200 | 23 | – | – | |
| Phobius | 201 | 205 | 5 | – | – | |
| TMHMM | 206 | 228 | 23 | – | – | |
| Phobius | 206 | 228 | 23 | – | – | |
| Phobius | 229 | 239 | 11 | – | – | |
| Phobius | 240 | 256 | 17 | – | – | |
| Phobius | 257 | 337 | 81 | – | – | |
| SUPERFAMILY | 319 | 552 | 234 | 9.29E-19 | ||
| TMHMM | 338 | 360 | 23 | – | – | |
| Phobius | 338 | 361 | 24 | – | – | |
| Phobius | 362 | 372 | 11 | – | – | |
| Phobius | 373 | 392 | 20 | – | – | |
| Phobius | 393 | 411 | 19 | – | – | |
| TMHMM | 410 | 432 | 23 | – | – | |
| Phobius | 412 | 432 | 21 | – | – | |
| Gene3D | 415 | 513 | 99 | 8.10E-05 | – | |
| Phobius | 433 | 452 | 20 | – | – | |
| TMHMM | 453 | 475 | 23 | – | – | |
| Phobius | 453 | 475 | 23 | – | – | |
| Phobius | 476 | 494 | 19 | – | – | |
| TMHMM | 495 | 513 | 19 | – | – | |
| Phobius | 495 | 513 | 19 | – | – | |
| Phobius | 514 | 533 | 20 | – | – | |
| Phobius | 534 | 552 | 19 | – | – | |
| TMHMM | 534 | 556 | 23 | – | – | |
| Phobius | 553 | 562 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0287689.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0287689.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.