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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0288109 |
| Transcript ID | Lj0g3v0288109.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: vacuolar amino acid transporter 1-like isoform 2 [Glycine max] gi|356531772|ref|XP_003534450.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 170 | 170 | 1.80E-23 | ||
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 1 | 179 | 179 | 1.30E-98 | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 179 | 179 | 1.30E-98 | – | |
| ProSiteProfiles | 1 | 22 | 22 | 7 | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 12 | 34 | 23 | – | – | |
| Phobius | 35 | 53 | 19 | – | – | |
| Phobius | 54 | 78 | 25 | – | – | |
| TMHMM | 56 | 78 | 23 | – | – | |
| Phobius | 79 | 89 | 11 | – | – | |
| Phobius | 90 | 113 | 24 | – | – | |
| TMHMM | 90 | 112 | 23 | – | – | |
| Phobius | 114 | 118 | 5 | – | – | |
| TMHMM | 116 | 138 | 23 | – | – | |
| Phobius | 119 | 140 | 22 | – | – | |
| Phobius | 141 | 151 | 11 | – | – | |
| TMHMM | 151 | 173 | 23 | – | – | |
| Phobius | 152 | 173 | 22 | – | – | |
| Phobius | 174 | 180 | 7 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0288109.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0288109.1, powered by CORGI.
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