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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0289499 |
| Transcript ID | Lj0g3v0289499.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | aminophospholipid ATPase [Populus trichocarpa] gi|224121336|ref|XP_002318557.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 83 | 83 | – | – | |
| PANTHER | 6 | 1186 | 1181 | 0 | – | |
| PANTHER | 6 | 1186 | 1181 | 0 | ||
| Pfam | 41 | 106 | 66 | 2.20E-23 | ||
| SUPERFAMILY | 55 | 142 | 88 | 1.70E-60 | – | |
| TIGRFAM | 56 | 1148 | 1093 | 0 | ||
| Gene3D | 83 | 212 | 130 | 6.60E-36 | ||
| Phobius | 84 | 102 | 19 | – | – | |
| Phobius | 103 | 107 | 5 | – | – | |
| Phobius | 108 | 124 | 17 | – | – | |
| Phobius | 125 | 302 | 178 | – | – | |
| SUPERFAMILY | 147 | 210 | 64 | 2.48E-15 | – | |
| SUPERFAMILY | 245 | 285 | 41 | 2.48E-15 | – | |
| Gene3D | 250 | 286 | 37 | 6.60E-36 | ||
| SUPERFAMILY | 287 | 330 | 44 | 1.70E-60 | – | |
| Phobius | 303 | 325 | 23 | – | – | |
| TMHMM | 303 | 325 | 23 | – | – | |
| Phobius | 326 | 357 | 32 | – | – | |
| TMHMM | 357 | 379 | 23 | – | – | |
| Phobius | 358 | 379 | 22 | – | – | |
| SUPERFAMILY | 359 | 419 | 61 | 1.70E-60 | – | |
| Phobius | 380 | 925 | 546 | – | – | |
| Gene3D | 415 | 461 | 47 | 8.20E-46 | ||
| SUPERFAMILY | 420 | 436 | 17 | 3.49E-34 | ||
| PRINTS | 425 | 439 | 15 | 3.20E-08 | – | |
| ProSitePatterns | 427 | 433 | 7 | – | ||
| SUPERFAMILY | 485 | 701 | 217 | 3.92E-25 | ||
| Gene3D | 509 | 706 | 198 | 8.20E-46 | ||
| Pfam | 521 | 625 | 105 | 2.10E-09 | – | |
| SUPERFAMILY | 639 | 746 | 108 | 3.49E-34 | ||
| Gene3D | 707 | 763 | 57 | 6.60E-50 | ||
| PRINTS | 749 | 759 | 11 | 3.20E-08 | – | |
| SUPERFAMILY | 819 | 918 | 100 | 3.49E-34 | ||
| TIGRFAM | 827 | 946 | 120 | 1.50E-31 | ||
| Gene3D | 834 | 920 | 87 | 6.60E-50 | ||
| PRINTS | 863 | 882 | 20 | 3.20E-08 | – | |
| Pfam | 891 | 1141 | 251 | 1.30E-82 | ||
| SUPERFAMILY | 912 | 1141 | 230 | 1.70E-60 | – | |
| TMHMM | 924 | 946 | 23 | – | – | |
| Phobius | 926 | 943 | 18 | – | – | |
| Phobius | 944 | 954 | 11 | – | – | |
| Phobius | 955 | 975 | 21 | – | – | |
| TMHMM | 956 | 975 | 20 | – | – | |
| Phobius | 976 | 1004 | 29 | – | – | |
| Phobius | 1005 | 1027 | 23 | – | – | |
| TMHMM | 1005 | 1024 | 20 | – | – | |
| Phobius | 1028 | 1046 | 19 | – | – | |
| TMHMM | 1039 | 1056 | 18 | – | – | |
| Phobius | 1047 | 1066 | 20 | – | – | |
| Phobius | 1067 | 1072 | 6 | – | – | |
| TMHMM | 1069 | 1091 | 23 | – | – | |
| Phobius | 1073 | 1092 | 20 | – | – | |
| Phobius | 1093 | 1111 | 19 | – | – | |
| TMHMM | 1111 | 1133 | 23 | – | – | |
| Phobius | 1112 | 1132 | 21 | – | – | |
| Phobius | 1133 | 1186 | 54 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Expression pattern of Lj0g3v0289499.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0289499.2, powered by CORGI.
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