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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0290909 |
| Transcript ID | Lj0g3v0290909.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | V-type proton ATPase 16 kDa proteolipid subunit c4 [Medicago truncatula] gi|357483701|ref|XP_003612137.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 164 | 164 | 4.30E-134 | – | |
| PANTHER | 1 | 164 | 164 | 4.30E-134 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| Gene3D | 7 | 158 | 152 | 1.40E-67 | – | |
| Phobius | 12 | 34 | 23 | – | – | |
| TIGRFAM | 12 | 120 | 109 | 7.20E-52 | ||
| TMHMM | 12 | 34 | 23 | – | – | |
| SUPERFAMILY | 12 | 76 | 65 | 2.35E-06 | ||
| Pfam | 16 | 75 | 60 | 6.30E-14 | ||
| PRINTS | 29 | 53 | 25 | 8.40E-59 | ||
| Phobius | 35 | 54 | 20 | – | – | |
| TMHMM | 54 | 76 | 23 | – | – | |
| Phobius | 55 | 75 | 21 | – | – | |
| PRINTS | 55 | 79 | 25 | 8.40E-59 | ||
| Phobius | 76 | 94 | 19 | – | – | |
| SUPERFAMILY | 86 | 155 | 70 | 1.12E-19 | ||
| TMHMM | 93 | 115 | 23 | – | – | |
| Phobius | 95 | 117 | 23 | – | – | |
| Pfam | 96 | 154 | 59 | 9.30E-21 | ||
| PRINTS | 106 | 132 | 27 | 8.40E-59 | ||
| Phobius | 118 | 128 | 11 | – | – | |
| Phobius | 129 | 154 | 26 | – | – | |
| TMHMM | 130 | 152 | 23 | – | – | |
| PRINTS | 133 | 156 | 24 | 8.40E-59 | ||
| Phobius | 155 | 164 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Proton transmembrane transporter activity | Enables the transfer of a proton from one side of a membrane to the other. | ||
| Cellular component | Proton-transporting two-sector ATPase complex, proton-transporting domain | A protein complex that forms part of a proton-transporting two-sector ATPase complex and carries out proton transport across a membrane. The proton-transporting domain (F0, V0, or A0) includes integral and peripheral membrane proteins. | ||
| Cellular component | Proton-transporting V-type ATPase, V0 domain | A protein complex that forms part of a proton-transporting V-type ATPase and mediates proton transport across a membrane. The V0 complex consists of at least four different subunits (a,c,d and e); six or more c subunits form a proton-binding rotor ring. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of Lj0g3v0290909.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0290909.1, powered by CORGI.
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