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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0293799 |
| Transcript ID | Lj0g3v0293799.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calcium-transporting ATPase 9, plasma membrane-type-like [Cicer arietinum] gi|502080501|ref|XP_004486584.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 185 | 185 | 2.50E-38 | ||
| PANTHER | 1 | 216 | 216 | 7.30E-219 | – | |
| Phobius | 1 | 139 | 139 | – | – | |
| PANTHER | 1 | 216 | 216 | 7.30E-219 | – | |
| Pfam | 1 | 94 | 94 | 2.90E-08 | – | |
| TIGRFAM | 46 | 160 | 115 | 1.70E-32 | ||
| Gene3D | 55 | 341 | 287 | 4.40E-131 | ||
| PRINTS | 80 | 96 | 17 | 6.00E-09 | ||
| PRINTS | 80 | 99 | 20 | 2.20E-12 | – | |
| PRINTS | 104 | 116 | 13 | 2.20E-12 | – | |
| PRINTS | 112 | 137 | 26 | 6.00E-09 | ||
| SUPERFAMILY | 130 | 342 | 213 | 3.40E-60 | – | |
| TMHMM | 140 | 162 | 23 | – | – | |
| Phobius | 140 | 160 | 21 | – | – | |
| Phobius | 161 | 171 | 11 | – | – | |
| Pfam | 165 | 340 | 176 | 3.70E-46 | ||
| TMHMM | 167 | 189 | 23 | – | – | |
| Phobius | 172 | 189 | 18 | – | – | |
| Phobius | 190 | 286 | 97 | – | – | |
| PANTHER | 232 | 358 | 127 | 7.30E-219 | – | |
| PANTHER | 232 | 358 | 127 | 7.30E-219 | – | |
| TMHMM | 286 | 305 | 20 | – | – | |
| Phobius | 287 | 307 | 21 | – | – | |
| Phobius | 308 | 318 | 11 | – | – | |
| Phobius | 319 | 340 | 22 | – | – | |
| TMHMM | 320 | 342 | 23 | – | – | |
| Phobius | 341 | 364 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0293799.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0293799.1, powered by CORGI.
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