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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0304909 |
| Transcript ID | Lj0g3v0304909.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At2g37320-like [Cicer arietinum] gi|502106500|ref|XP_004492962.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 59 | 480 | 422 | 1.00E-228 | – | |
| PANTHER | 59 | 480 | 422 | 1.00E-228 | – | |
| ProSiteProfiles | 171 | 201 | 31 | 7.783 | ||
| Pfam | 202 | 248 | 47 | 4.10E-11 | ||
| ProSiteProfiles | 202 | 236 | 35 | 10.063 | ||
| TIGRFAM | 204 | 237 | 34 | 2.60E-04 | ||
| ProSiteProfiles | 237 | 271 | 35 | 6.884 | ||
| Gene3D | 254 | 365 | 112 | 6.30E-05 | ||
| ProSiteProfiles | 272 | 302 | 31 | 6.917 | ||
| TIGRFAM | 277 | 304 | 28 | 6.50E-04 | ||
| Pfam | 303 | 349 | 47 | 5.10E-16 | ||
| ProSiteProfiles | 303 | 337 | 35 | 14.337 | ||
| TIGRFAM | 305 | 339 | 35 | 5.70E-10 | ||
| ProSiteProfiles | 338 | 372 | 35 | 10.304 | ||
| ProSiteProfiles | 373 | 403 | 31 | 6.27 | ||
| Pfam | 376 | 400 | 25 | 0.32 | ||
| Gene3D | 433 | 458 | 26 | 6.30E-05 | ||
| ProSiteProfiles | 439 | 473 | 35 | 7.662 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0304909.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0304909.1, powered by CORGI.
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