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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0308609 |
| Transcript ID | Lj0g3v0308609.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: general transcription factor 3C polypeptide 3-like [Cicer arietinum] gi|502133758|ref|XP_004501881.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 472 | 472 | 1.20E-118 | – | |
| MobiDBLite | 1 | 57 | 57 | – | – | |
| Coils | 22 | 49 | 28 | – | – | |
| Coils | 64 | 84 | 21 | – | – | |
| MobiDBLite | 102 | 126 | 25 | – | – | |
| ProSiteProfiles | 129 | 162 | 34 | 6.903 | ||
| SMART | 129 | 162 | 34 | 57 | ||
| ProSiteProfiles | 129 | 475 | 347 | 37.859 | ||
| Gene3D | 135 | 220 | 86 | 7.90E-16 | ||
| Pfam | 136 | 196 | 61 | 2.80E-04 | – | |
| SUPERFAMILY | 139 | 337 | 199 | 2.28E-24 | ||
| SMART | 163 | 196 | 34 | 10 | ||
| ProSiteProfiles | 163 | 196 | 34 | 10.915 | ||
| ProSiteProfiles | 197 | 230 | 34 | 5.133 | ||
| Gene3D | 221 | 314 | 94 | 7.30E-18 | ||
| ProSiteProfiles | 231 | 264 | 34 | 5.281 | ||
| SMART | 231 | 264 | 34 | 92 | ||
| ProSiteProfiles | 265 | 298 | 34 | 5.694 | ||
| SUPERFAMILY | 296 | 397 | 102 | 3.63E-06 | ||
| SMART | 301 | 334 | 34 | 3.6 | ||
| ProSiteProfiles | 301 | 334 | 34 | 8.408 | ||
| Gene3D | 315 | 384 | 70 | 3.70E-06 | ||
| Gene3D | 385 | 465 | 81 | 2.70E-08 | ||
| ProSiteProfiles | 408 | 441 | 34 | 7.906 | ||
| SMART | 408 | 441 | 34 | 11 | ||
| Pfam | 410 | 436 | 27 | 0.091 | ||
| SUPERFAMILY | 411 | 464 | 54 | 2.28E-24 | ||
| MobiDBLite | 462 | 481 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0308609.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0308609.1, powered by CORGI.
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