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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0311499 |
| Transcript ID | Lj0g3v0311499.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pattern formation protein EMB30-like [Glycine max] gi|356569278|ref|XP_003552830.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 319 | 319 | – | – | |
| PANTHER | 135 | 1255 | 1121 | 0 | – | |
| PANTHER | 135 | 1255 | 1121 | 0 | – | |
| Phobius | 320 | 339 | 20 | – | – | |
| Pfam | 323 | 484 | 162 | 1.50E-35 | ||
| Phobius | 340 | 358 | 19 | – | – | |
| SUPERFAMILY | 354 | 524 | 171 | 2.42E-05 | ||
| Phobius | 359 | 376 | 18 | – | – | |
| Phobius | 377 | 396 | 20 | – | – | |
| Phobius | 397 | 417 | 21 | – | – | |
| Phobius | 418 | 1344 | 927 | – | – | |
| Gene3D | 561 | 644 | 84 | 1.70E-25 | – | |
| ProSiteProfiles | 562 | 751 | 190 | 40.519 | ||
| SMART | 566 | 753 | 188 | 3.10E-98 | ||
| SUPERFAMILY | 567 | 757 | 191 | 2.35E-72 | ||
| Pfam | 570 | 753 | 184 | 2.20E-65 | ||
| CDD | 570 | 753 | 184 | 2.15E-86 | – | |
| Gene3D | 645 | 757 | 113 | 2.80E-47 | ||
| SUPERFAMILY | 821 | 910 | 90 | 2.42E-05 | ||
| SUPERFAMILY | 972 | 1179 | 208 | 2.42E-05 | ||
| SUPERFAMILY | 1242 | 1342 | 101 | 2.42E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ARF guanyl-nucleotide exchange factor activity | Stimulates the exchange of guanyl nucleotides associated with the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase. | ||
| Biological process | Regulation of ARF protein signal transduction | Any process that modulates the frequency, rate or extent of ARF protein signal transduction. |
Expression pattern of Lj0g3v0311499.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0311499.1, powered by CORGI.
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