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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032691
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We have found 33 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.800s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0311499.1
n.a. PREDICTED: pattern formation protein EMB30-like [Glycine max] gi|356569278|ref|XP_003552830.1| chr0 162663397 162669282 +
2 domain predictions
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Lj0g3v0323739.2
n.a. PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cicer arietinum] gi|502104766|ref|XP_004492642.1| chr0 169055808 169069677 -
2 domain predictions
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Lj3g3v2095940.1
n.a. PREDICTED: protein MON2 homolog isoform 2 [Glycine max] gi|356535141|ref|XP_003536107.1| chr3 26619206 26643243 -
2 domain predictions
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Lj3g3v2733940.1
n.a. PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cicer arietinum] gi|502157877|ref|XP_004510941.1| chr3 33581075 33594001 -
2 domain predictions
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Lj4g3v2215540.1
n.a. PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5-like [Cicer arietinum] gi|502150646|ref|XP_004508055.1| chr4 30756956 30773367 -
2 domain predictions
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Lj4g3v2215540.2
n.a. PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 5-like [Cicer arietinum] gi|502150646|ref|XP_004508055.1| chr4 30756956 30774550 -
2 domain predictions
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Lj5g3v0804080.1
n.a. PREDICTED: ARF guanine-nucleotide exchange factor GNOM-like isoform X1 [Cicer arietinum] gi|502137738|ref|XP_004503168.1| chr5 11548627 11555691 -
2 domain predictions
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LotjaGi1g1v0000200.1
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT4G38200.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1; TrEMBL-Plants: tr|A0A0B2R8L7|A0A0B2R8L7_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi1g1v0000200 LjG1.1_chr1 261409 277953 -
2 domain predictions
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LotjaGi1g1v0000200.2
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT4G38200.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1; TrEMBL-Plants: tr|I1JJW7|I1JJW7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0000200 LjG1.1_chr1 261464 277862 -
2 domain predictions
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LotjaGi1g1v0000200.5
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT4G38200.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1; TrEMBL-Plants: tr|A0A0B2R8L7|A0A0B2R8L7_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi1g1v0000200 LjG1.1_chr1 261710 277614 -
2 domain predictions
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LotjaGi1g1v0087500.2
n.a. Guanine nucleotide exchange family protein; TAIR: AT1G13980.1 sec7 domain-containing protein; Swiss-Prot: sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM; TrEMBL-Plants: tr|K7M5B1|K7M5B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0087500 LjG1.1_chr1 12680535 12696082 -
2 domain predictions
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LotjaGi1g1v0087500.3
n.a. Guanine nucleotide exchange family protein; TAIR: AT1G13980.1 sec7 domain-containing protein; Swiss-Prot: sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM; TrEMBL-Plants: tr|K7M5B1|K7M5B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0087500 LjG1.1_chr1 12681366 12695119 -
2 domain predictions
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LotjaGi1g1v0087500.4
n.a. Guanine nucleotide exchange family protein; TAIR: AT1G13980.1 sec7 domain-containing protein; Swiss-Prot: sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM; TrEMBL-Plants: tr|K7M5B1|K7M5B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0087500 LjG1.1_chr1 12681366 12695119 -
2 domain predictions
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LotjaGi1g1v0087500.5
n.a. Guanine nucleotide exchange family protein; TAIR: AT1G13980.1 sec7 domain-containing protein; Swiss-Prot: sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM; TrEMBL-Plants: tr|V7B7Q8|V7B7Q8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0087500 LjG1.1_chr1 12689015 12695119 -
2 domain predictions
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LotjaGi1g1v0463300.1
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G60860.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2; TrEMBL-Plants: tr|G7L099|G7L099_MEDTR Brefeldin A-inhibited guanine nucleotide-exchange protein; Found in the gene: LotjaGi1g1v0463300 LjG1.1_chr1 96822179 96837225 +
2 domain predictions
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LotjaGi1g1v0463300.2
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G60860.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2; TrEMBL-Plants: tr|G7L099|G7L099_MEDTR Brefeldin A-inhibited guanine nucleotide-exchange protein; Found in the gene: LotjaGi1g1v0463300 LjG1.1_chr1 96822596 96836225 +
2 domain predictions
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LotjaGi1g1v0463300.3
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G60860.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2; TrEMBL-Plants: tr|A0A151TB78|A0A151TB78_CAJCA Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi1g1v0463300 LjG1.1_chr1 96828028 96836225 +
2 domain predictions
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LotjaGi2g1v0214000.1
n.a. Guanine nucleotide exchange family protein; TAIR: AT5G19610.1 GNOM-like 2; Swiss-Prot: sp|F4K2K3|GNL2_ARATH ARF guanine-nucleotide exchange factor GNL2; TrEMBL-Plants: tr|G7KNH6|G7KNH6_MEDTR ARF guanine-nucleotide exchange factor GNOM protein; Found in the gene: LotjaGi2g1v0214000 LjG1.1_chr2 66411748 66416954 -
2 domain predictions
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LotjaGi3g1v0432300.1
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G60860.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2; TrEMBL-Plants: tr|A0A0B2S605|A0A0B2S605_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi3g1v0432300 LjG1.1_chr3 84390656 84398240 -
2 domain predictions
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LotjaGi3g1v0432300.2
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G60860.1 SEC7-like guanine nucleotide exchange family protein; Swiss-Prot: sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2; TrEMBL-Plants: tr|I1N3F3|I1N3F3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0432300 LjG1.1_chr3 84390656 84401316 -
2 domain predictions
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LotjaGi4g1v0318600.1
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G43300.3 HOPM interactor 7; Swiss-Prot: sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5; TrEMBL-Plants: tr|A0A0B2SIY4|A0A0B2SIY4_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi4g1v0318600 LjG1.1_chr4 69604109 69621815 +
2 domain predictions
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LotjaGi4g1v0318600.2
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G43300.3 HOPM interactor 7; Swiss-Prot: sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5; TrEMBL-Plants: tr|A0A0B2SIY4|A0A0B2SIY4_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi4g1v0318600 LjG1.1_chr4 69604475 69621356 +
2 domain predictions
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LotjaGi4g1v0318600.3
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G43300.3 HOPM interactor 7; Swiss-Prot: sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5; TrEMBL-Plants: tr|A0A0B2SIY4|A0A0B2SIY4_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi4g1v0318600 LjG1.1_chr4 69604475 69621356 +
2 domain predictions
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LotjaGi4g1v0318600.4
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G43300.3 HOPM interactor 7; Swiss-Prot: sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5; TrEMBL-Plants: tr|A0A0B2SIY4|A0A0B2SIY4_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi4g1v0318600 LjG1.1_chr4 69604734 69621356 +
2 domain predictions
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LotjaGi4g1v0318600.5
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT3G43300.3 HOPM interactor 7; Swiss-Prot: sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5; TrEMBL-Plants: tr|A0A0B2SIY4|A0A0B2SIY4_GLYSO Brefeldin A-inhibited guanine nucleotide-exchange protein 2; Found in the gene: LotjaGi4g1v0318600 LjG1.1_chr4 69604734 69621356 +
2 domain predictions
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LotjaGi5g1v0215500.1
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT5G27970.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9VLT1|MON2_DROME Protein MON2 homolog; TrEMBL-Plants: tr|K7LJP9|K7LJP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0215500 LjG1.1_chr5 52105046 52131007 +
2 domain predictions
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LotjaGi5g1v0215500.2
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT5G27970.3 ARM repeat superfamily protein; Swiss-Prot: sp|Q9VLT1|MON2_DROME Protein MON2 homolog; TrEMBL-Plants: tr|A0A0B2Q805|A0A0B2Q805_GLYSO Protein MON2 like; Found in the gene: LotjaGi5g1v0215500 LjG1.1_chr5 52105046 52131007 +
2 domain predictions
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LotjaGi5g1v0215500.4
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT5G27970.3 ARM repeat superfamily protein; Swiss-Prot: sp|Q9VLT1|MON2_DROME Protein MON2 homolog; TrEMBL-Plants: tr|A0A0B2Q805|A0A0B2Q805_GLYSO Protein MON2 like; Found in the gene: LotjaGi5g1v0215500 LjG1.1_chr5 52105078 52127851 +
2 domain predictions
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LotjaGi5g1v0215500.5
n.a. Brefeldin A-inhibited guanine nucleotide-exchange protein; TAIR: AT5G27970.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9VLT1|MON2_DROME Protein MON2 homolog; TrEMBL-Plants: tr|K7LJP9|K7LJP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0215500 LjG1.1_chr5 52105078 52127851 +
2 domain predictions
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LotjaGi6g1v0064200.1
n.a. Guanine nucleotide exchange family protein; TAIR: AT1G13980.1 sec7 domain-containing protein; Swiss-Prot: sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM; TrEMBL-Plants: tr|A0A0L9U8L1|A0A0L9U8L1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0064200 LjG1.1_chr6 11860447 11867240 -
2 domain predictions
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LotjaGi6g1v0064200.2
n.a. Guanine nucleotide exchange family protein; TAIR: AT1G13980.1 sec7 domain-containing protein; Swiss-Prot: sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM; TrEMBL-Plants: tr|V7D1N8|V7D1N8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0064200 LjG1.1_chr6 11860961 11866021 -
2 domain predictions
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LotjaGi6g1v0064200.3
n.a. Guanine nucleotide exchange family protein; TAIR: AT1G13980.1 sec7 domain-containing protein; Swiss-Prot: sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM; TrEMBL-Plants: tr|A0A0L9U8L1|A0A0L9U8L1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0064200 LjG1.1_chr6 11860961 11866021 -
2 domain predictions
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LotjaGi6g1v0064300.1
n.a. Guanine nucleotide exchange family protein; TAIR: AT1G13980.1 sec7 domain-containing protein; Swiss-Prot: sp|Q42510|GNOM_ARATH ARF guanine-nucleotide exchange factor GNOM; TrEMBL-Plants: tr|I1MZA2|I1MZA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0064300 LjG1.1_chr6 11886636 11893873 -
2 domain predictions
 –