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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0312389 |
| Transcript ID | Lj0g3v0312389.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Theobroma cacao] gi|508710299|gb|EOY02196.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 193 | 193 | – | – | |
| TIGRFAM | 1 | 416 | 416 | 9.50E-147 | ||
| PANTHER | 1 | 434 | 434 | 0 | – | |
| PANTHER | 1 | 434 | 434 | 0 | ||
| Gene3D | 2 | 30 | 29 | 5.00E-29 | ||
| SUPERFAMILY | 88 | 186 | 99 | 7.95E-17 | ||
| Gene3D | 102 | 187 | 86 | 5.00E-29 | ||
| TIGRFAM | 103 | 213 | 111 | 4.90E-32 | ||
| Pfam | 159 | 409 | 251 | 2.50E-80 | ||
| SUPERFAMILY | 180 | 409 | 230 | 1.31E-26 | – | |
| TMHMM | 192 | 214 | 23 | – | – | |
| Phobius | 194 | 211 | 18 | – | – | |
| Phobius | 212 | 222 | 11 | – | – | |
| Phobius | 223 | 243 | 21 | – | – | |
| TMHMM | 224 | 243 | 20 | – | – | |
| Phobius | 244 | 275 | 32 | – | – | |
| Phobius | 276 | 300 | 25 | – | – | |
| TMHMM | 276 | 298 | 23 | – | – | |
| Phobius | 301 | 311 | 11 | – | – | |
| Phobius | 312 | 334 | 23 | – | – | |
| TMHMM | 313 | 335 | 23 | – | – | |
| Phobius | 335 | 340 | 6 | – | – | |
| Phobius | 341 | 360 | 20 | – | – | |
| TMHMM | 342 | 364 | 23 | – | – | |
| Phobius | 361 | 379 | 19 | – | – | |
| TMHMM | 379 | 401 | 23 | – | – | |
| Phobius | 380 | 400 | 21 | – | – | |
| Phobius | 401 | 434 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Phospholipid transport | The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Expression pattern of Lj0g3v0312389.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0312389.2, powered by CORGI.
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