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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0316919 |
| Transcript ID | Lj0g3v0316919.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like [Glycine max] gi|356577033|ref|XP_003556634.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 81 | 115 | 35 | 9.098 | ||
| Pfam | 91 | 113 | 23 | 2.30E-04 | ||
| PANTHER | 92 | 366 | 275 | 9.90E-96 | – | |
| TIGRFAM | 92 | 116 | 25 | 7.20E-04 | ||
| Gene3D | 96 | 168 | 73 | 3.00E-05 | ||
| ProSiteProfiles | 116 | 150 | 35 | 12.715 | ||
| TIGRFAM | 119 | 152 | 34 | 2.20E-09 | ||
| Pfam | 119 | 163 | 45 | 1.30E-14 | ||
| ProSiteProfiles | 151 | 185 | 35 | 11.816 | ||
| TIGRFAM | 154 | 187 | 34 | 8.10E-07 | ||
| ProSiteProfiles | 186 | 221 | 36 | 8.013 | ||
| ProSiteProfiles | 222 | 256 | 35 | 9.788 | ||
| Pfam | 225 | 269 | 45 | 3.40E-08 | ||
| Gene3D | 225 | 328 | 104 | 3.00E-05 | ||
| ProSiteProfiles | 257 | 287 | 31 | 6.763 | ||
| Pfam | 297 | 346 | 50 | 3.20E-13 | ||
| ProSiteProfiles | 298 | 332 | 35 | 12.233 | ||
| TIGRFAM | 300 | 334 | 35 | 1.30E-09 | ||
| ProSiteProfiles | 333 | 367 | 35 | 9.876 | ||
| TIGRFAM | 335 | 364 | 30 | 7.40E-04 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0316919.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0316919.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.