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Lj0g3v0318359.1

Overview

Field Value
Gene ID Lj0g3v0318359
Transcript ID Lj0g3v0318359.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description Kinase superfamily protein isoform 1 [Theobroma cacao] gi|508712563|gb|EOY04460.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
SIGNAL_PEPTIDE_N_REGION
1 10 10 – –
Phobius
SIGNAL_PEPTIDE
1 27 27 – –
Phobius
SIGNAL_PEPTIDE_H_REGION
11 22 12 – –
Phobius
SIGNAL_PEPTIDE_C_REGION
23 27 5 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
28 687 660 – –
PANTHER
PTHR27001:SF4
81 133 53 1.60E-245 –
PANTHER
PTHR27001
81 133 53 1.60E-245 –
MobiDBLite
mobidb-lite
96 120 25 – –
MobiDBLite
mobidb-lite
143 189 47 – –
PANTHER
PTHR27001
176 202 27 1.60E-245 –
PANTHER
PTHR27001:SF4
176 202 27 1.60E-245 –
MobiDBLite
mobidb-lite
227 281 55 – –
PANTHER
PTHR27001
235 613 379 1.60E-245 –
PANTHER
PTHR27001:SF4
235 613 379 1.60E-245 –
SUPERFAMILY
SSF56112
284 593 310 6.15E-45
IPR011009
Gene3D
G3DSA:3.30.200.20
294 387 94 2.60E-09 –
ProSiteProfiles
PS50011
306 583 278 22.379
IPR000719
Pfam
PF07714
350 581 232 3.00E-26
IPR001245
Gene3D
G3DSA:1.10.510.10
392 585 194 1.50E-30 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj0g3v0318359.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0318359.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.