Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0318769.1

Overview

Field Value
Gene ID Lj0g3v0318769
Transcript ID Lj0g3v0318769.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein ODORANT1-like [Cicer arietinum] gi|502157248|ref|XP_004510807.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10641:SF622
1 274 274 8.30E-149 –
PANTHER
PTHR10641
1 274 274 8.30E-149 –
ProSiteProfiles
PS51294
10 63 54 15.243
IPR017930
SUPERFAMILY
SSF46689
12 110 99 6.24E-29
IPR009057
SMART
SM00717
14 65 52 1.50E-11
IPR001005
Pfam
PF00249
15 63 49 7.30E-14
IPR001005
Gene3D
G3DSA:1.10.10.60
16 70 55 3.10E-21
IPR009057
CDD
cd00167
17 63 47 2.70E-08 –
ProSiteProfiles
PS51294
64 118 55 26.1
IPR017930
SMART
SM00717
68 116 49 7.30E-16
IPR001005
Pfam
PF00249
69 114 46 5.00E-16
IPR001005
Gene3D
G3DSA:1.10.10.60
71 119 49 3.60E-27
IPR009057
CDD
cd00167
71 114 44 1.28E-11 –
MobiDBLite
mobidb-lite
197 223 27 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj0g3v0318769.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0318769.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.