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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0329169 |
| Transcript ID | Lj0g3v0329169.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Peptide transporter PTR3-A [Medicago truncatula] gi|357461027|ref|XP_003600795.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 47 | 47 | – | – | |
| Pfam | 19 | 379 | 361 | 1.60E-78 | ||
| PANTHER | 20 | 436 | 417 | 1.20E-298 | ||
| PANTHER | 20 | 436 | 417 | 1.20E-298 | – | |
| SUPERFAMILY | 40 | 103 | 64 | 4.97E-20 | ||
| TMHMM | 45 | 67 | 23 | – | – | |
| Phobius | 48 | 67 | 20 | – | – | |
| Phobius | 68 | 72 | 5 | – | – | |
| TMHMM | 71 | 93 | 23 | – | – | |
| Phobius | 73 | 93 | 21 | – | – | |
| Phobius | 94 | 186 | 93 | – | – | |
| SUPERFAMILY | 185 | 417 | 233 | 4.97E-20 | ||
| Phobius | 187 | 209 | 23 | – | – | |
| TMHMM | 187 | 209 | 23 | – | – | |
| Phobius | 210 | 228 | 19 | – | – | |
| Phobius | 229 | 249 | 21 | – | – | |
| TMHMM | 229 | 248 | 20 | – | – | |
| Phobius | 250 | 268 | 19 | – | – | |
| Gene3D | 269 | 388 | 120 | 3.20E-05 | – | |
| TMHMM | 269 | 291 | 23 | – | – | |
| Phobius | 269 | 290 | 22 | – | – | |
| Phobius | 291 | 309 | 19 | – | – | |
| TMHMM | 306 | 328 | 23 | – | – | |
| Phobius | 310 | 334 | 25 | – | – | |
| Phobius | 335 | 345 | 11 | – | – | |
| Phobius | 346 | 367 | 22 | – | – | |
| TMHMM | 349 | 371 | 23 | – | – | |
| Phobius | 368 | 390 | 23 | – | – | |
| TMHMM | 391 | 410 | 20 | – | – | |
| Phobius | 391 | 410 | 20 | – | – | |
| Phobius | 411 | 437 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0329169.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0329169.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.