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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0332249 |
| Transcript ID | Lj0g3v0332249.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cation/H(+) antiporter 4-like [Cicer arietinum] gi|502135103|ref|XP_004502222.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | – | – | |
| PANTHER | 1 | 622 | 622 | 4.90E-287 | – | |
| PANTHER | 1 | 622 | 622 | 4.90E-287 | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 4 | 12 | 9 | – | – | |
| Pfam | 4 | 290 | 287 | 9.30E-18 | ||
| Phobius | 13 | 17 | 5 | – | – | |
| Phobius | 18 | 26 | 9 | – | – | |
| TMHMM | 24 | 46 | 23 | – | – | |
| Phobius | 27 | 47 | 21 | – | – | |
| Phobius | 48 | 58 | 11 | – | – | |
| TMHMM | 59 | 81 | 23 | – | – | |
| Phobius | 59 | 82 | 24 | – | – | |
| Phobius | 83 | 93 | 11 | – | – | |
| Phobius | 94 | 116 | 23 | – | – | |
| TMHMM | 94 | 116 | 23 | – | – | |
| Phobius | 117 | 127 | 11 | – | – | |
| TMHMM | 128 | 147 | 20 | – | – | |
| Phobius | 128 | 145 | 18 | – | – | |
| Phobius | 146 | 175 | 30 | – | – | |
| TMHMM | 151 | 173 | 23 | – | – | |
| Phobius | 176 | 195 | 20 | – | – | |
| TMHMM | 178 | 195 | 18 | – | – | |
| Phobius | 196 | 206 | 11 | – | – | |
| Phobius | 207 | 231 | 25 | – | – | |
| TMHMM | 210 | 232 | 23 | – | – | |
| Phobius | 232 | 270 | 39 | – | – | |
| TMHMM | 239 | 261 | 23 | – | – | |
| Phobius | 271 | 293 | 23 | – | – | |
| TMHMM | 271 | 293 | 23 | – | – | |
| Phobius | 294 | 625 | 332 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Solute:proton antiporter activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out). | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0332249.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0332249.1, powered by CORGI.
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