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Lj0g3v0336449.1

Overview

Field Value
Gene ID Lj0g3v0336449
Transcript ID Lj0g3v0336449.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like isoform X2 [Cicer arietinum] gi|502174137|ref|XP_004515445.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 19 19
PANTHER 1 414 414 6.90E-208
PANTHER 1 414 414 6.90E-208
ProSiteProfiles 1 415 415 23.139
Pfam 2 227 226 2.10E-28
TMHMM 15 37 23
CDD 15 171 157 1.07E-12
Gene3D 16 179 164 1.70E-29
SUPERFAMILY 16 418 403 2.22E-44
Phobius 20 39 20
Phobius 40 47 8
Phobius 48 71 24
TMHMM 49 71 23
Phobius 72 76 5
TMHMM 75 97 23
Phobius 77 98 22
Phobius 99 109 11
Phobius 110 129 20
TMHMM 110 132 23
Phobius 130 148 19
TMHMM 147 169 23
Phobius 149 170 22
Phobius 171 208 38
Phobius 209 228 20
TMHMM 209 228 20
Phobius 229 255 27
Gene3D 236 415 180 1.30E-05
Phobius 256 275 20
TMHMM 256 278 23
Phobius 276 286 11
TMHMM 285 307 23
Phobius 287 305 19
Phobius 306 310 5
Phobius 311 338 28
TMHMM 317 339 23
Phobius 339 349 11
Phobius 350 370 21
TMHMM 360 377 18
Phobius 371 389 19
Phobius 390 412 23
TMHMM 392 414 23
Phobius 413 430 18

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Transmembrane transporter activity Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of Lj0g3v0336449.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0336449.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.