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Lj0g3v0345339.2

Overview

Field Value
Gene ID Lj0g3v0345339
Transcript ID Lj0g3v0345339.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description Ras-like protein [Medicago truncatula] gi|357440495|ref|XP_003590525.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS51419
1 145 145 17.319 –
PANTHER
PTHR24073
14 124 111 2.20E-56 –
PANTHER
PTHR24073:SF584
14 124 111 2.20E-56 –
SMART
SM00173
17 143 127 0.009 –
SMART
SM00175
21 145 125 2.00E-14 –
SMART
SM00174
24 142 119 0.0057 –
Gene3D
G3DSA:3.40.50.300
30 124 95 9.10E-30
IPR027417
SUPERFAMILY
SSF52540
30 129 100 2.47E-26
IPR027417
Pfam
PF00071
31 124 94 3.50E-29
IPR001806
TIGRFAM
TIGR00231
37 116 80 2.50E-12
IPR005225
PRINTS
PR00449
38 60 23 6.30E-11 –
PRINTS
PR00449
100 113 14 6.30E-11 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003924
Molecular function GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj0g3v0345339.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0345339.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.