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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0347229 |
| Transcript ID | Lj0g3v0347229.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LRR repeats and ubiquitin-like domain-containing protein At2g30105-like [Cicer arietinum] gi|502129431|ref|XP_004500301.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 47 | 166 | 120 | 3.10E-22 | ||
| SUPERFAMILY | 56 | 267 | 212 | 2.89E-40 | ||
| PANTHER | 79 | 281 | 203 | 2.70E-34 | – | |
| PANTHER | 79 | 281 | 203 | 2.70E-34 | – | |
| SMART | 136 | 155 | 20 | 79 | – | |
| SMART | 136 | 158 | 23 | 0.26 | ||
| ProSiteProfiles | 138 | 160 | 23 | 7.404 | ||
| Pfam | 138 | 194 | 57 | 1.30E-09 | ||
| SMART | 159 | 178 | 20 | 1.3 | – | |
| SMART | 159 | 181 | 23 | 0.76 | ||
| ProSiteProfiles | 161 | 182 | 22 | 7.527 | ||
| Gene3D | 167 | 266 | 100 | 2.30E-25 | ||
| SMART | 182 | 205 | 24 | 30 | ||
| SMART | 182 | 201 | 20 | 280 | – | |
| ProSiteProfiles | 184 | 205 | 22 | 5.725 | ||
| SMART | 205 | 224 | 20 | 290 | – | |
| SMART | 206 | 227 | 22 | 150 | ||
| ProSiteProfiles | 207 | 228 | 22 | 5.463 | ||
| SMART | 228 | 247 | 20 | 370 | – | |
| SMART | 228 | 251 | 24 | 12 | ||
| ProSiteProfiles | 230 | 251 | 22 | 6.849 | ||
| ProSiteProfiles | 254 | 274 | 21 | 4.816 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj0g3v0347229.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0347229.1, powered by CORGI.
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