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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0347809 |
| Transcript ID | Lj0g3v0347809.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Cytochrome c oxidase subunit [Medicago truncatula] gi|357436121|ref|XP_003588336.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| PANTHER | 1 | 433 | 433 | 0 | ||
| Pfam | 1 | 367 | 367 | 7.10E-123 | ||
| CDD | 1 | 410 | 410 | 0 | ||
| PANTHER | 1 | 433 | 433 | 0 | – | |
| SignalP | 1 | 32 | 32 | – | – | |
| SUPERFAMILY | 1 | 426 | 426 | 1.70E-177 | ||
| ProSiteProfiles | 1 | 426 | 426 | 95.002 | ||
| Gene3D | 1 | 386 | 386 | 1.40E-203 | ||
| TMHMM | 9 | 31 | 23 | – | – | |
| Phobius | 11 | 22 | 12 | – | – | |
| Phobius | 23 | 27 | 5 | – | – | |
| Phobius | 28 | 58 | 31 | – | – | |
| PRINTS | 31 | 43 | 13 | 2.30E-105 | ||
| TMHMM | 51 | 73 | 23 | – | – | |
| Phobius | 59 | 80 | 22 | – | – | |
| PRINTS | 63 | 81 | 19 | 2.30E-105 | ||
| Phobius | 81 | 91 | 11 | – | – | |
| PRINTS | 92 | 111 | 20 | 2.30E-105 | ||
| Phobius | 92 | 119 | 28 | – | – | |
| TMHMM | 93 | 115 | 23 | – | – | |
| Phobius | 120 | 151 | 32 | – | – | |
| PRINTS | 121 | 142 | 22 | 2.30E-105 | ||
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 152 | 171 | 20 | – | – | |
| Phobius | 172 | 177 | 6 | – | – | |
| TMHMM | 175 | 197 | 23 | – | – | |
| Phobius | 178 | 199 | 22 | – | – | |
| PRINTS | 189 | 204 | 16 | 2.30E-105 | ||
| Phobius | 200 | 210 | 11 | – | – | |
| Phobius | 211 | 234 | 24 | – | – | |
| TMHMM | 212 | 234 | 23 | – | – | |
| PRINTS | 213 | 234 | 22 | 2.30E-105 | ||
| Phobius | 235 | 245 | 11 | – | – | |
| Phobius | 246 | 265 | 20 | – | – | |
| TMHMM | 246 | 268 | 23 | – | – | |
| PRINTS | 248 | 266 | 19 | 2.30E-105 | ||
| Phobius | 266 | 284 | 19 | – | – | |
| PRINTS | 276 | 295 | 20 | 2.30E-105 | ||
| TMHMM | 283 | 305 | 23 | – | – | |
| Phobius | 285 | 305 | 21 | – | – | |
| Phobius | 306 | 316 | 11 | – | – | |
| Phobius | 317 | 340 | 24 | – | – | |
| TMHMM | 317 | 339 | 23 | – | – | |
| PRINTS | 326 | 347 | 22 | 2.30E-105 | ||
| Phobius | 341 | 359 | 19 | – | – | |
| TMHMM | 354 | 373 | 20 | – | – | |
| Phobius | 360 | 382 | 23 | – | – | |
| Phobius | 383 | 433 | 51 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cytochrome-c oxidase activity | Catalysis of the reaction: 4 ferrocytochrome c + O2 + 4 H+ = 4 ferricytochrome c + 2 H2O. | ||
| Biological process | Aerobic respiration | The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Cellular component | Respiratory chain complex IV | A part of the respiratory chain, containing the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj0g3v0347809.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0347809.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.