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Lj0g3v0350949.1

Overview

Field Value
Gene ID Lj0g3v0350949
Transcript ID Lj0g3v0350949.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: uridine-cytidine kinase C-like [Glycine max] gi|356498109|ref|XP_003517896.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10285
12 211 200 3.90E-142 –
PANTHER
PTHR10285:SF76
12 211 200 3.90E-142 –
Gene3D
G3DSA:3.40.50.300
54 210 157 2.70E-38
IPR027417
PRINTS
PR00988
62 79 18 1.90E-12
IPR000764
SUPERFAMILY
SSF52540
63 210 148 5.46E-19
IPR027417
CDD
cd02028
64 209 146 1.84E-60 –
Pfam
PF00485
65 210 146 5.50E-22
IPR006083
PRINTS
PR00988
129 144 16 1.90E-12
IPR000764
PRINTS
PR00988
185 195 11 1.90E-12
IPR000764
PRINTS
PR00988
199 210 12 1.90E-12
IPR000764

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of

Genome browser

LORE1 insertions 23

Expression data

Expression pattern

Expression pattern of Lj0g3v0350949.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0350949.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.